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The map label for this gene is 52842177

Identifier: 52842177

GI number: 52842177

Start: 2193697

End: 2194470

Strand: Direct

Name: 52842177

Synonym: lpg1960

Alternate gene names: NA

Gene position: 2193697-2194470 (Clockwise)

Preceding gene: 52842176

Following gene: 52842179

Centisome position: 64.56

GC content: 34.24

Gene sequence:

>774_bases
ATGTTTTTCTCTAAAGATGAAAAAAATCCAATAAAAAGAGCTCTTCAAGGTGAATTATTACAAAATGAGCCCTTTATACA
ACTATGTACAAAAATAGAAAACTATTTGATGGATACCGAAGCTGTAAACGAGCAACTTATTGAATTAAACGAACAACTGA
CAATGAGGTTAAAGGAAAAAGGACTCAAACCCGGAGAAAAAGGAGCAACAAAGCAGTTAAGAACACTCATACAGGAAATA
CTAACCGAGGCTGGCTTTAGAGAGGGAATGTTACAAACAATAGGGAATAAGCCATTAAAAAAAGAAGACTTCATGTTTTT
AGTATCATCAGGATTTATGTTAAAAGACAGCAGTCTAAGAGCATCATCCCATGGTGAGCTGACCCATGCAATTCAATGGT
GTTTAATCATATTGAAACAAAAGAAAGACAGCAGTTTTCTTGAAAACATACCTACTAGTGAGATTTGTGACCGAATTTAT
AAAAAACTAGGGCACCAAGATTCTTCGAATCCTAATTATCCTTTTACTTGTTGGGATGTACTTATCGATAAATTAGGAGA
AATAGACTCCAGATCCCCGGAATGGCTTTCCGATCATATTCAAAACGACGAGGATCAAATTTTTCCTGTGTTAAGAGAGG
TAATAAAAAACAGAACTGAAAAAGGCAAAACAGAAGAAAACAAGGGAAAATTACAAAAAAAACTGGAAAATCCGCCAGAA
CATTATGAAAAACACGAGGAAATTGAAAATATTCTCATGCCAAAACCCAAATAA

Upstream 100 bases:

>100_bases
AACACTCAAGTCAACCAATAAGTAAGCAATAACGAATATTTATAAACAATATTTATTAAAAATAATCTATACTTAAAAAA
ATTAGCGCGTTGGAGGTCAT

Downstream 100 bases:

>100_bases
ATTTGAACTACTACAGACCAACTAATCCATTTGAATTCAGTATGGTTTTTCCCCATACTCATCAGGCACAACATATTCTT
TAAGTATCAAATCATCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQLTMRLKEKGLKPGEKGATKQLRTLIQEI
LTEAGFREGMLQTIGNKPLKKEDFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIY
KKLGHQDSSNPNYPFTCWDVLIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLENPPE
HYEKHEEIENILMPKPK

Sequences:

>Translated_257_residues
MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQLTMRLKEKGLKPGEKGATKQLRTLIQEI
LTEAGFREGMLQTIGNKPLKKEDFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIY
KKLGHQDSSNPNYPFTCWDVLIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLENPPE
HYEKHEEIENILMPKPK
>Mature_257_residues
MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQLTMRLKEKGLKPGEKGATKQLRTLIQEI
LTEAGFREGMLQTIGNKPLKKEDFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIY
KKLGHQDSSNPNYPFTCWDVLIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLENPPE
HYEKHEEIENILMPKPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29843; Mature: 29843

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQLTMRLKEK
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLKPGEKGATKQLRTLIQEILTEAGFREGMLQTIGNKPLKKEDFMFLVSSGFMLKDSSLR
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCC
ASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIYKKLGHQDSSNPNYPFTCWDV
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLENPPE
HHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
HYEKHEEIENILMPKPK
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQLTMRLKEK
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLKPGEKGATKQLRTLIQEILTEAGFREGMLQTIGNKPLKKEDFMFLVSSGFMLKDSSLR
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCC
ASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIYKKLGHQDSSNPNYPFTCWDV
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLENPPE
HHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
HYEKHEEIENILMPKPK
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA