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The map label for this gene is 52842169

Identifier: 52842169

GI number: 52842169

Start: 2180947

End: 2181756

Strand: Direct

Name: 52842169

Synonym: lpg1952

Alternate gene names: NA

Gene position: 2180947-2181756 (Clockwise)

Preceding gene: 52842168

Following gene: 52842174

Centisome position: 64.19

GC content: 37.16

Gene sequence:

>810_bases
ATGAAAATTATCCATATTTCCGATTTGCATTTTGGCATGCATCAACCTAAAGTTTTAAATGCGTTTCTTCAGGAAACCGC
CCTCGATAAACCAGATATCATTCTTATATCAGGAGATTTAACTCAACGTGGACTCTCGTATCAGTACCGGGAGCTTTGCT
CATTTATAAATCAACTGCCAGCTCAAACGCTTTCTGTTCCCGGTAATCATGATATTCCCTTTTATAATGTTCCAGCACGT
TTTATATTCCCTTTTCGCCAGTACAAACGCTACATAAACCCGGATGTAACCACCACCTTTGAAAACGATTGTGTGCGTAT
TTTGGGGGTTAATAGTGTCAACCCCTTGCAATTAAAGGATGGAAAATTATCTCATGAAACATTAAATAGAATTAAACGAT
ATTTTAAACCGGACGATGAAAAATTAAACTTGCTCTTCTTTCATCATAATTTTGATTATATGGAAGGATTACATAAGCCA
CTAGCGAATGCACAAACGCTTTTAAGCTTTTTAAAGCAAAGTACCATTCATTTGGTTTGCACAGGTCATCTACACTATGC
TCATTTAAGTTTAATTGCTAAAAATAATGGCTACTCCTGTCTGGCGCTGCATGCCGGCTCATTACTGTGCCCACGCAGCA
AAGATAATTTAAACAGCTATTATGTGATTGAAGCGAATCAGAAAAAGTGCCGCATTACCTGGCGTGTTTTTGATCAAGAA
CACTTTACTGCTCGCTCCATCTATTTTATTGATTTTAATAAAAAAAATGCGTCATTTGAGCACCTAAATCCAGTCACAGA
TGATGCTTGA

Upstream 100 bases:

>100_bases
ATAAAATTACCATCTCTTTAGATGGGGATACGCTGGCTATAGCACCCCCTCTTTATTATAAAATTTTACCTAAATCACTG
AAATTACTGACTAAAAAAAT

Downstream 100 bases:

>100_bases
TGCACAGGACTACACTGTATTTCGCTTGTCAGAACACTAGTATGCCAATTATCTTATAGCTTAATATCAAAAGATTCTGA
TTCCGATGTTGAGCCCTCAA

Product: 3',5'-cyclic nucleotide phosphodiesterase

Products: nucleoside 5'-phosphate

Alternate protein names: 3 5'-Cyclic-Nucleotide Phosphodiesterase; Phosphohydrolase; DNA Repair Exonuclease; Ser/Thr Protein Phosphatase Family Protein; Transcriptional Regulator Icc Related Protein; Metallo-Phosphoesterase; 3 5'-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; Calcineurin-Like Phosphoesterase Family; Metallophosphoesterase Protein; Phosphodiesterase; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; LacZ Expression Regulatory Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKIIHISDLHFGMHQPKVLNAFLQETALDKPDIILISGDLTQRGLSYQYRELCSFINQLPAQTLSVPGNHDIPFYNVPAR
FIFPFRQYKRYINPDVTTTFENDCVRILGVNSVNPLQLKDGKLSHETLNRIKRYFKPDDEKLNLLFFHHNFDYMEGLHKP
LANAQTLLSFLKQSTIHLVCTGHLHYAHLSLIAKNNGYSCLALHAGSLLCPRSKDNLNSYYVIEANQKKCRITWRVFDQE
HFTARSIYFIDFNKKNASFEHLNPVTDDA

Sequences:

>Translated_269_residues
MKIIHISDLHFGMHQPKVLNAFLQETALDKPDIILISGDLTQRGLSYQYRELCSFINQLPAQTLSVPGNHDIPFYNVPAR
FIFPFRQYKRYINPDVTTTFENDCVRILGVNSVNPLQLKDGKLSHETLNRIKRYFKPDDEKLNLLFFHHNFDYMEGLHKP
LANAQTLLSFLKQSTIHLVCTGHLHYAHLSLIAKNNGYSCLALHAGSLLCPRSKDNLNSYYVIEANQKKCRITWRVFDQE
HFTARSIYFIDFNKKNASFEHLNPVTDDA
>Mature_269_residues
MKIIHISDLHFGMHQPKVLNAFLQETALDKPDIILISGDLTQRGLSYQYRELCSFINQLPAQTLSVPGNHDIPFYNVPAR
FIFPFRQYKRYINPDVTTTFENDCVRILGVNSVNPLQLKDGKLSHETLNRIKRYFKPDDEKLNLLFFHHNFDYMEGLHKP
LANAQTLLSFLKQSTIHLVCTGHLHYAHLSLIAKNNGYSCLALHAGSLLCPRSKDNLNSYYVIEANQKKCRITWRVFDQE
HFTARSIYFIDFNKKNASFEHLNPVTDDA

Specific function: Unknown

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.4.17

Molecular weight: Translated: 31155; Mature: 31155

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIHISDLHFGMHQPKVLNAFLQETALDKPDIILISGDLTQRGLSYQYRELCSFINQLP
CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
AQTLSVPGNHDIPFYNVPARFIFPFRQYKRYINPDVTTTFENDCVRILGVNSVNPLQLKD
HHEECCCCCCCCCEEECCHHEEECHHHHHHHCCCCCEEEECCCCEEEEECCCCCCEEECC
GKLSHETLNRIKRYFKPDDEKLNLLFFHHNFDYMEGLHKPLANAQTLLSFLKQSTIHLVC
CCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEE
TGHLHYAHLSLIAKNNGYSCLALHAGSLLCPRSKDNLNSYYVIEANQKKCRITWRVFDQE
ECCEEEEEEEEEECCCCCEEEEEECCCEECCCCCCCCCEEEEEECCCCEEEEEEEEECCC
HFTARSIYFIDFNKKNASFEHLNPVTDDA
CCEEEEEEEEEECCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MKIIHISDLHFGMHQPKVLNAFLQETALDKPDIILISGDLTQRGLSYQYRELCSFINQLP
CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
AQTLSVPGNHDIPFYNVPARFIFPFRQYKRYINPDVTTTFENDCVRILGVNSVNPLQLKD
HHEECCCCCCCCCEEECCHHEEECHHHHHHHCCCCCEEEECCCCEEEEECCCCCCEEECC
GKLSHETLNRIKRYFKPDDEKLNLLFFHHNFDYMEGLHKPLANAQTLLSFLKQSTIHLVC
CCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEE
TGHLHYAHLSLIAKNNGYSCLALHAGSLLCPRSKDNLNSYYVIEANQKKCRITWRVFDQE
ECCEEEEEEEEEECCCCCEEEEEECCCEECCCCCCCCCEEEEEECCCCEEEEEEEEECCC
HFTARSIYFIDFNKKNASFEHLNPVTDDA
CCEEEEEEEEEECCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nucleoside 3',5'-cyclic phosphate; H2O

Specific reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA