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The map label for this gene is 52842163

Identifier: 52842163

GI number: 52842163

Start: 2173974

End: 2174645

Strand: Reverse

Name: 52842163

Synonym: lpg1946

Alternate gene names: NA

Gene position: 2174645-2173974 (Counterclockwise)

Preceding gene: 52842165

Following gene: 52842162

Centisome position: 64.0

GC content: 37.8

Gene sequence:

>672_bases
ATGTTGGCCCCTGAAATATCCTTGCTGGATCATCTTCCAGGCTATATTGGCTGGAAGGATTTAAACCGCAATTATTTAGG
TGCAAACAAAGCGCTGCTGGAATTGAAAGGATTTCGTGATATAGAAGAGCTGGCTGGTAAAACAGATGAGGAGTTGTCGC
CTTGGGCTACTGAAGAGAATAAAATGTTCCAGCAGCAAGATTTGCGCGTATTAAACGGCGAAAAAATAGCAACAGTACAT
TTCGATTCAAAGACTAGTGAAGTTTTCCTGTTGGAAAAACGCCCTTTAACAGATCAGGACCAGAAGGTGACGGGATTGAT
TTATTATTGCCATCCTTATCCCAAGAATGAAATATTCAGAGTTTTAAGGCTGTTTGATGATAAATGGCATTTAAGTCCCC
ATTATTATACACTGAATGACAATAAAAATATCTATGGATTAACAGACCGTGAGCATGAATGTGTGTTTTTATTAATAAGA
GGAAAATCCGCAAAAGAAATTGGGGCTTTGCTTTCTCTATCCAAACGGACTATAGAGTCGTACATAGAAAATATTAAGAA
TAAAATGGATTGCAGGAATAAAGCGGAGATACTGGTAAAAGCAGTGTTAAATGGTTATCACAATTACTTCCCTGCAAGAT
TACAGCAAGCGGCTATTATAAGGTCACTTTAA

Upstream 100 bases:

>100_bases
TATACAGGCAGTTGATTTGGGCAGGCTACCATTTAAAATAACGACATTAACCCCTTAATAATCCGCGCGCAAAATTAGCA
TTCATTGGAGGATAGGACTA

Downstream 100 bases:

>100_bases
TAATTATGATGCTGAACTTCTACCGTATAAATACGGTAATTTAAGCAAGGCTGAATACTGTATTATTTTACAAACTTACT
TGAATCATTTGAAAGGAAAT

Product: transcriptional regulator LuxR

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; PAS And GerE Domain-Containing Transcriptional Regulator; Transcription Regulator LuxR Family Protein; Transcriptional Regulator; Transcriptional Regulator LuxR

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLAPEISLLDHLPGYIGWKDLNRNYLGANKALLELKGFRDIEELAGKTDEELSPWATEENKMFQQQDLRVLNGEKIATVH
FDSKTSEVFLLEKRPLTDQDQKVTGLIYYCHPYPKNEIFRVLRLFDDKWHLSPHYYTLNDNKNIYGLTDREHECVFLLIR
GKSAKEIGALLSLSKRTIESYIENIKNKMDCRNKAEILVKAVLNGYHNYFPARLQQAAIIRSL

Sequences:

>Translated_223_residues
MLAPEISLLDHLPGYIGWKDLNRNYLGANKALLELKGFRDIEELAGKTDEELSPWATEENKMFQQQDLRVLNGEKIATVH
FDSKTSEVFLLEKRPLTDQDQKVTGLIYYCHPYPKNEIFRVLRLFDDKWHLSPHYYTLNDNKNIYGLTDREHECVFLLIR
GKSAKEIGALLSLSKRTIESYIENIKNKMDCRNKAEILVKAVLNGYHNYFPARLQQAAIIRSL
>Mature_223_residues
MLAPEISLLDHLPGYIGWKDLNRNYLGANKALLELKGFRDIEELAGKTDEELSPWATEENKMFQQQDLRVLNGEKIATVH
FDSKTSEVFLLEKRPLTDQDQKVTGLIYYCHPYPKNEIFRVLRLFDDKWHLSPHYYTLNDNKNIYGLTDREHECVFLLIR
GKSAKEIGALLSLSKRTIESYIENIKNKMDCRNKAEILVKAVLNGYHNYFPARLQQAAIIRSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25944; Mature: 25944

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPEISLLDHLPGYIGWKDLNRNYLGANKALLELKGFRDIEELAGKTDEELSPWATEEN
CCCCCHHHHHHCCCCCCHHHCCCCCCCCCHHHEECCCCCCHHHHCCCCCCCCCCCCCCHH
KMFQQQDLRVLNGEKIATVHFDSKTSEVFLLEKRPLTDQDQKVTGLIYYCHPYPKNEIFR
HHHHHHCCEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHH
VLRLFDDKWHLSPHYYTLNDNKNIYGLTDREHECVFLLIRGKSAKEIGALLSLSKRTIES
HHHHHCCCEECCCCEEEECCCCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
YIENIKNKMDCRNKAEILVKAVLNGYHNYFPARLQQAAIIRSL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAPEISLLDHLPGYIGWKDLNRNYLGANKALLELKGFRDIEELAGKTDEELSPWATEEN
CCCCCHHHHHHCCCCCCHHHCCCCCCCCCHHHEECCCCCCHHHHCCCCCCCCCCCCCCHH
KMFQQQDLRVLNGEKIATVHFDSKTSEVFLLEKRPLTDQDQKVTGLIYYCHPYPKNEIFR
HHHHHHCCEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHH
VLRLFDDKWHLSPHYYTLNDNKNIYGLTDREHECVFLLIRGKSAKEIGALLSLSKRTIES
HHHHHCCCEECCCCEEEECCCCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
YIENIKNKMDCRNKAEILVKAVLNGYHNYFPARLQQAAIIRSL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA