Click here to switch to the map view.

The map label for this gene is 52841979

Identifier: 52841979

GI number: 52841979

Start: 1954461

End: 1955108

Strand: Reverse

Name: 52841979

Synonym: lpg1752

Alternate gene names: NA

Gene position: 1955108-1954461 (Counterclockwise)

Preceding gene: 52841980

Following gene: 52841978

Centisome position: 57.54

GC content: 37.04

Gene sequence:

>648_bases
CTGCGGTTCTTGCGGGTGGGCCCTTGTGGGAGGGAAACCATGCTAGAGTTTGCCGAATTTCAGCAAAATGCATTGAAATT
AACAGATCAATTAAAGAAACGCAGCATACCATCCTTAGGCTGTTTTTGTTTTTTTTCAGTGATATTACCCAATACAGCGG
CTATTGAAGATACTCATACGATTAAATTGATTGCTTATAGCCTGGATAGCGAGAATGACGATGACTTAATCGCTTATCTG
AAGGGTGTCACAACATACTCTGCTGTAACTCCAAAAAATATTAACGAATTCAAAAAAAAGGTACTAACTGGAATTTATTT
AATGATGTGGTCACATTATAGCTCTACTGTCTCGAATTTAATGAATAGCACTTTGGTTGAGCTATTTCAAAGAGATTTGC
AAGTGAGTTCCCCACAAAAGATGAGTGACACTTTGTTTGATGCCAGTTTAGAGGCTTTAAGTCAATATTGTTCATTTGCC
TATCAAAATCGTAATGAACGCATTTATGACAACTTAATTCGACGTTTAGGTAAGACGGTGCAAGCAGATATTCATGCCTT
ACGTCATTCCAGGGAGAAACAGGAAACTTCATTCTATGATATTTATAAAGGAATTATGCGTACTTTAGGACTTAATAGCG
TGTTTTAG

Upstream 100 bases:

>100_bases
GAAATATTTGTTGGCAAATAGTTAAATTAATAGTTGCAATATTATGTGTAGGTTGATATAAAAATTAAAAGAGTCTTGAT
CATCAAAGGCGTATTACTCG

Downstream 100 bases:

>100_bases
ACAGGAGACACTATGACTTTTACTCCGCCCGAGTTCAAAATATTAAGTGTAAATACTCGTAACTTAGAGACAATATTCTC
TACCTTGCTAGGCAGGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRFLRVGPCGRETMLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTAAIEDTHTIKLIAYSLDSENDDDLIAYL
KGVTTYSAVTPKNINEFKKKVLTGIYLMMWSHYSSTVSNLMNSTLVELFQRDLQVSSPQKMSDTLFDASLEALSQYCSFA
YQNRNERIYDNLIRRLGKTVQADIHALRHSREKQETSFYDIYKGIMRTLGLNSVF

Sequences:

>Translated_215_residues
MRFLRVGPCGRETMLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTAAIEDTHTIKLIAYSLDSENDDDLIAYL
KGVTTYSAVTPKNINEFKKKVLTGIYLMMWSHYSSTVSNLMNSTLVELFQRDLQVSSPQKMSDTLFDASLEALSQYCSFA
YQNRNERIYDNLIRRLGKTVQADIHALRHSREKQETSFYDIYKGIMRTLGLNSVF
>Mature_215_residues
MRFLRVGPCGRETMLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTAAIEDTHTIKLIAYSLDSENDDDLIAYL
KGVTTYSAVTPKNINEFKKKVLTGIYLMMWSHYSSTVSNLMNSTLVELFQRDLQVSSPQKMSDTLFDASLEALSQYCSFA
YQNRNERIYDNLIRRLGKTVQADIHALRHSREKQETSFYDIYKGIMRTLGLNSVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24705; Mature: 24705

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLRVGPCGRETMLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTAAIEDTHT
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCE
IKLIAYSLDSENDDDLIAYLKGVTTYSAVTPKNINEFKKKVLTGIYLMMWSHYSSTVSNL
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNSTLVELFQRDLQVSSPQKMSDTLFDASLEALSQYCSFAYQNRNERIYDNLIRRLGKTV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QADIHALRHSREKQETSFYDIYKGIMRTLGLNSVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFLRVGPCGRETMLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTAAIEDTHT
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCE
IKLIAYSLDSENDDDLIAYLKGVTTYSAVTPKNINEFKKKVLTGIYLMMWSHYSSTVSNL
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNSTLVELFQRDLQVSSPQKMSDTLFDASLEALSQYCSFAYQNRNERIYDNLIRRLGKTV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QADIHALRHSREKQETSFYDIYKGIMRTLGLNSVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA