Click here to switch to the map view.

The map label for this gene is 52841969

Identifier: 52841969

GI number: 52841969

Start: 1944499

End: 1944945

Strand: Direct

Name: 52841969

Synonym: lpg1742

Alternate gene names: NA

Gene position: 1944499-1944945 (Clockwise)

Preceding gene: 52841968

Following gene: 52841975

Centisome position: 57.23

GC content: 49.89

Gene sequence:

>447_bases
ATGTCATTTTTGTATGCGACTTTACCTCCTTATTTATATAGGAGCCAAAGGCATATAATGGTATGTATTAACATAGAATA
TGGATTAGAGTCGGTCGATAAGCCGGGTTCTGTCGTGGGCAACCATTCATCTGGGACATGCGTCACCACATGCCTCAAGC
GACCTACCCGAATCCCGTATGGGCCATACGTTAGGACCTTGCAGTCAAATGGATTCCTATTTGGTCTTGCTCCGAGTGGG
GTTTTCCCTGCCACGACTGTTACCAATCGCGCGGTGCGCTCTTACCGCACCATTTCACCCTTACCTACGATTCCCAAAGG
AAAAGTGGGCGGTATATTTTCTGTGGCACTTTCCGTAGGCTCACACCTCCCAGGAGTTACCTGGCACTCTGCCCTATGGA
GCCCGGACTTTCCTCCCCTTGCTGTTAGGCAAAGAGCGATTGCCTGA

Upstream 100 bases:

>100_bases
TCAAGTAGTGGATCAAGCGACTACTGATTCAATAGAAGAAGAAATTGCAAGTGAAATAGCCGAGATCTCCCTGGAGTGTA
TAAGTGTTATATAGCTTGGC

Downstream 100 bases:

>100_bases
CCGACTCTGACTTCAATATTAGCAGAGTGCCCAGGCAAAGGCCATAATTAACGATGAATTTCTATTAGAATACCGCGAAA
AATAACTGAACTTGGAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSFLYATLPPYLYRSQRHIMVCINIEYGLESVDKPGSVVGNHSSGTCVTTCLKRPTRIPYGPYVRTLQSNGFLFGLAPSG
VFPATTVTNRAVRSYRTISPLPTIPKGKVGGIFSVALSVGSHLPGVTWHSALWSPDFPPLAVRQRAIA

Sequences:

>Translated_148_residues
MSFLYATLPPYLYRSQRHIMVCINIEYGLESVDKPGSVVGNHSSGTCVTTCLKRPTRIPYGPYVRTLQSNGFLFGLAPSG
VFPATTVTNRAVRSYRTISPLPTIPKGKVGGIFSVALSVGSHLPGVTWHSALWSPDFPPLAVRQRAIA
>Mature_147_residues
SFLYATLPPYLYRSQRHIMVCINIEYGLESVDKPGSVVGNHSSGTCVTTCLKRPTRIPYGPYVRTLQSNGFLFGLAPSGV
FPATTVTNRAVRSYRTISPLPTIPKGKVGGIFSVALSVGSHLPGVTWHSALWSPDFPPLAVRQRAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16062; Mature: 15931

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLYATLPPYLYRSQRHIMVCINIEYGLESVDKPGSVVGNHSSGTCVTTCLKRPTRIPY
CCCEECCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHCCCCCCCC
GPYVRTLQSNGFLFGLAPSGVFPATTVTNRAVRSYRTISPLPTIPKGKVGGIFSVALSVG
CCHHEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHC
SHLPGVTWHSALWSPDFPPLAVRQRAIA
CCCCCCCCHHHCCCCCCCCHHHHHHCCC
>Mature Secondary Structure 
SFLYATLPPYLYRSQRHIMVCINIEYGLESVDKPGSVVGNHSSGTCVTTCLKRPTRIPY
CCEECCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHCCCCCCCC
GPYVRTLQSNGFLFGLAPSGVFPATTVTNRAVRSYRTISPLPTIPKGKVGGIFSVALSVG
CCHHEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHC
SHLPGVTWHSALWSPDFPPLAVRQRAIA
CCCCCCCCHHHCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA