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The map label for this gene is gatC

Identifier: 52841962

GI number: 52841962

Start: 1936350

End: 1936652

Strand: Direct

Name: gatC

Synonym: lpg1735

Alternate gene names: 52841962

Gene position: 1936350-1936652 (Clockwise)

Preceding gene: 52841959

Following gene: 52841963

Centisome position: 56.99

GC content: 36.63

Gene sequence:

>303_bases
ATGACCATGACTCTCTCTGCTAAAGATCTTGAAAATATTTCAAAATTGGCTTATTTAAATGAAGACTCTGAGCATTCTGC
AAAATTGACTCAAGAAGTAAGTGCGATCATGGATTTTGTTGACCAGCTCAAAACAATAGATACAAGCCAAATAGCACCTC
TTTTTCATCCTTTGGCACTAAATCAACGCTTAAGACCAGATGAAGTAACTGAAGCGGAATGTCTTGCTGAATTAGAAGCC
ATGGCGCCATTATTTGAGGATAACTTATATTTGGTTCCCAAGGTGATATCATCGGATAAATAA

Upstream 100 bases:

>100_bases
CTCTAGGAAAGCAACTTGGCTCAACAGACTAAAAGATAATTAAACTAATACTTCATTTTTAGAACAATACCGCTATAATG
TATAACCCTTATATTTGGAT

Downstream 100 bases:

>100_bases
TAATGGAACATTACTCACTGGCTCAATTATCAAAGGCTCTTCATAATCGAGAATTTTCAAGTGTTGAATTAACACAACAC
TGTATTAACAAAATTCAAAG

Product: glutamyl/tRNA (Gln) amidotransferase, C subunit

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTMTLSAKDLENISKLAYLNEDSEHSAKLTQEVSAIMDFVDQLKTIDTSQIAPLFHPLALNQRLRPDEVTEAECLAELEA
MAPLFEDNLYLVPKVISSDK

Sequences:

>Translated_100_residues
MTMTLSAKDLENISKLAYLNEDSEHSAKLTQEVSAIMDFVDQLKTIDTSQIAPLFHPLALNQRLRPDEVTEAECLAELEA
MAPLFEDNLYLVPKVISSDK
>Mature_99_residues
TMTLSAKDLENISKLAYLNEDSEHSAKLTQEVSAIMDFVDQLKTIDTSQIAPLFHPLALNQRLRPDEVTEAECLAELEAM
APLFEDNLYLVPKVISSDK

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 11209; Mature: 11078

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTLSAKDLENISKLAYLNEDSEHSAKLTQEVSAIMDFVDQLKTIDTSQIAPLFHPLAL
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NQRLRPDEVTEAECLAELEAMAPLFEDNLYLVPKVISSDK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHCCCCC
>Mature Secondary Structure 
TMTLSAKDLENISKLAYLNEDSEHSAKLTQEVSAIMDFVDQLKTIDTSQIAPLFHPLAL
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NQRLRPDEVTEAECLAELEAMAPLFEDNLYLVPKVISSDK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA