Click here to switch to the map view.

The map label for this gene is sidB

Identifier: 52841870

GI number: 52841870

Start: 1815442

End: 1816695

Strand: Reverse

Name: sidB

Synonym: lpg1642

Alternate gene names: NA

Gene position: 1816695-1815442 (Counterclockwise)

Preceding gene: 161723252

Following gene: 52841869

Centisome position: 53.47

GC content: 37.64

Gene sequence:

>1254_bases
ATGGCTAAAATTTATAATGCACCAAAACCTAAATATAGTGGTTGGGAATGGTTTAAATTTATTGCAATTCGAACGGTTTT
TCCCCCTGTTTTATTATGGGATTTAATAAAAATTGGGGCCAATAAACTGCTTGGTGAATGGGTTAGTGGTTTAGTGCTGC
CAGCACAAAATGAAAATTTTGATGATTTAGCTATTAGTGATGATACTGTAAGTAATTATAATGAAGACGATCTGATTTGT
GAGAAACATGATGTAATTACTCATGATGGAGCGCATTTAGATACATTTGAAGTAAGGCATAGGTCACAAGAAAGTATTGA
TCCCAAATACCAAAAATATATTATCAATTTGGTAGGGAATGGTATGTGTTATGAACATATCATTGACGATATAAAAGAAG
ATTCGAAGGCTCTTAAGGCCAATGTTATTGGTTTTAATCTTCGTGGTGTTGGTCAAAGTACAGGCAAAGCCAAATCAAGT
GAGGATTTGGTTGCAGATGGTATTGCACAAGTGCAAAGACTATTAGATCAAGGTGTTTCGCCACAAAATATTACCCTGAA
AGGTCATTCTCTTGGTGCAGGCGTGGCTTCCTTGGTAGCGCAACATTTTCATCAACTTGGACAGCCAATTAATCTATTTA
ATAGCCGTTCTTTCTCTACTATTACTAATTTCTTAGTAGGGCATATGCGTTTAGAGCGTGATGAAATTGGTCGAGCAATA
GGTCATAAAGACAGCACAGTAGGGACAATACTTGGATGGTTGGCTAAGCCCTTCATTAAATTCGGTGTTGCTTTAGCTAA
ATGGGAAATTAATGCAGGCAGTGCATTCAAGAGTGTTCCTGAAGCATATAAAGATTACATAGTGGTTAGGTCAAGAAAAG
AGATAAGGGGCGAACGTATCGATGATGCTGTGATTCCACATTATGCATCTATCCATAAAGAACTGGCTTCTGAGCGGCAT
AAGAAAAAGGCGGAGATTGATGAAGAAATTGCAAATCTGGATGATATCATTCGAAAAGCTGATCCTCTTGCGAAACCAGG
GTTGGCTAATGCAAGAGACGCTTTAGTCCAAGCTAGGGAAAAAATCAAAAGTGACAGAAAAATGGAGACTGATGTACAAT
ATGCTAATGGTCATAATTCAGACTGGAATGCATTGCATAATCGATCAGGTAAGAGCGCGCAGACTTTCTTTAGAGAGTTT
GTTCAAAGAACAGAAGCGGATCATGCCGTAAAAAGTATACCAGAAATAAATTAG

Upstream 100 bases:

>100_bases
AGATTAAGACAATTTTTTAAGTTTATAATATTCAGCTTAAGGTTAAATTAATATTAACTGTATATAATATGAACAATTTT
ATGTAAACAGGATTGGACTC

Downstream 100 bases:

>100_bases
AACCTTTTTATGATCCTCGTTGAACAGACGGGGATTTTTTTATTTCTGAAGAATTTCAGCTACGATTCTAAATCAATGAC
ACCAGACTGTACTTATTCCA

Product: SidB

Products: NA

Alternate protein names: SidB Homolog Substrate Of Dot/Icm System

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MAKIYNAPKPKYSGWEWFKFIAIRTVFPPVLLWDLIKIGANKLLGEWVSGLVLPAQNENFDDLAISDDTVSNYNEDDLIC
EKHDVITHDGAHLDTFEVRHRSQESIDPKYQKYIINLVGNGMCYEHIIDDIKEDSKALKANVIGFNLRGVGQSTGKAKSS
EDLVADGIAQVQRLLDQGVSPQNITLKGHSLGAGVASLVAQHFHQLGQPINLFNSRSFSTITNFLVGHMRLERDEIGRAI
GHKDSTVGTILGWLAKPFIKFGVALAKWEINAGSAFKSVPEAYKDYIVVRSRKEIRGERIDDAVIPHYASIHKELASERH
KKKAEIDEEIANLDDIIRKADPLAKPGLANARDALVQAREKIKSDRKMETDVQYANGHNSDWNALHNRSGKSAQTFFREF
VQRTEADHAVKSIPEIN

Sequences:

>Translated_417_residues
MAKIYNAPKPKYSGWEWFKFIAIRTVFPPVLLWDLIKIGANKLLGEWVSGLVLPAQNENFDDLAISDDTVSNYNEDDLIC
EKHDVITHDGAHLDTFEVRHRSQESIDPKYQKYIINLVGNGMCYEHIIDDIKEDSKALKANVIGFNLRGVGQSTGKAKSS
EDLVADGIAQVQRLLDQGVSPQNITLKGHSLGAGVASLVAQHFHQLGQPINLFNSRSFSTITNFLVGHMRLERDEIGRAI
GHKDSTVGTILGWLAKPFIKFGVALAKWEINAGSAFKSVPEAYKDYIVVRSRKEIRGERIDDAVIPHYASIHKELASERH
KKKAEIDEEIANLDDIIRKADPLAKPGLANARDALVQAREKIKSDRKMETDVQYANGHNSDWNALHNRSGKSAQTFFREF
VQRTEADHAVKSIPEIN
>Mature_416_residues
AKIYNAPKPKYSGWEWFKFIAIRTVFPPVLLWDLIKIGANKLLGEWVSGLVLPAQNENFDDLAISDDTVSNYNEDDLICE
KHDVITHDGAHLDTFEVRHRSQESIDPKYQKYIINLVGNGMCYEHIIDDIKEDSKALKANVIGFNLRGVGQSTGKAKSSE
DLVADGIAQVQRLLDQGVSPQNITLKGHSLGAGVASLVAQHFHQLGQPINLFNSRSFSTITNFLVGHMRLERDEIGRAIG
HKDSTVGTILGWLAKPFIKFGVALAKWEINAGSAFKSVPEAYKDYIVVRSRKEIRGERIDDAVIPHYASIHKELASERHK
KKAEIDEEIANLDDIIRKADPLAKPGLANARDALVQAREKIKSDRKMETDVQYANGHNSDWNALHNRSGKSAQTFFREFV
QRTEADHAVKSIPEIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46696; Mature: 46565

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIYNAPKPKYSGWEWFKFIAIRTVFPPVLLWDLIKIGANKLLGEWVSGLVLPAQNENF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCC
DDLAISDDTVSNYNEDDLICEKHDVITHDGAHLDTFEVRHRSQESIDPKYQKYIINLVGN
CCCEECCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHHHCC
GMCYEHIIDDIKEDSKALKANVIGFNLRGVGQSTGKAKSSEDLVADGIAQVQRLLDQGVS
CHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PQNITLKGHSLGAGVASLVAQHFHQLGQPINLFNSRSFSTITNFLVGHMRLERDEIGRAI
CCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHH
GHKDSTVGTILGWLAKPFIKFGVALAKWEINAGSAFKSVPEAYKDYIVVRSRKEIRGERI
CCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHEEEECHHHHCCCCC
DDAVIPHYASIHKELASERHKKKAEIDEEIANLDDIIRKADPLAKPGLANARDALVQARE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
KIKSDRKMETDVQYANGHNSDWNALHNRSGKSAQTFFREFVQRTEADHAVKSIPEIN
HHHHCCCHHHCCHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKIYNAPKPKYSGWEWFKFIAIRTVFPPVLLWDLIKIGANKLLGEWVSGLVLPAQNENF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCC
DDLAISDDTVSNYNEDDLICEKHDVITHDGAHLDTFEVRHRSQESIDPKYQKYIINLVGN
CCCEECCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHHHCC
GMCYEHIIDDIKEDSKALKANVIGFNLRGVGQSTGKAKSSEDLVADGIAQVQRLLDQGVS
CHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PQNITLKGHSLGAGVASLVAQHFHQLGQPINLFNSRSFSTITNFLVGHMRLERDEIGRAI
CCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHH
GHKDSTVGTILGWLAKPFIKFGVALAKWEINAGSAFKSVPEAYKDYIVVRSRKEIRGERI
CCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHEEEECHHHHCCCCC
DDAVIPHYASIHKELASERHKKKAEIDEEIANLDDIIRKADPLAKPGLANARDALVQARE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
KIKSDRKMETDVQYANGHNSDWNALHNRSGKSAQTFFREFVQRTEADHAVKSIPEIN
HHHHCCCHHHCCHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA