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The map label for this gene is skgA [H]

Identifier: 52841839

GI number: 52841839

Start: 1778154

End: 1779101

Strand: Reverse

Name: skgA [H]

Synonym: lpg1611

Alternate gene names: 52841839

Gene position: 1779101-1778154 (Counterclockwise)

Preceding gene: 52841840

Following gene: 52841838

Centisome position: 52.36

GC content: 37.87

Gene sequence:

>948_bases
ATGACACAATGGTTCGTAAAAGATTTAAGCCAATTAACTAGTGTATCAGTGCAAACGTTACATCACTATGACCGTATAGG
ATTGCTAAAGCCTTCATTACGACTTGCCAATGGGTACCGTGTTTACTCTGAGAAGGATTTATTGAAATTACAACAGATTA
TTGCTTTGAAGTTTTTCGGTTTTGAGTTGTCACAAATCAAAACCTTACTCGCTGAAGAAGGTAATGCGCTCAATCATTTT
AACAGCCAAGCTCGGGTGTTAGAACAAAAAGCATCCACTTTACTTGATGGAGCTAAAACTTTGAGGCGCATCATTGACTC
TGTTGACAAAAATCAATCTATCCCATGGGAAACCATTATTCAACTTATAGAGGTATATAAAATGACAGAACATCTTGAGC
ATGGCTGGGTAAAGGAAATATTCACGCCGGATGAATTAAAGCAGTACGCTGAGTTTGAAAAAGAAATGAAAGCCAATGCC
ACGCCTGAGCAAAAAGCAGCTATGGAAAACAATTGGTCCCAGCTGGTTGATGAGGTAAAAAATAATCTAAAGCAAGATCC
AGATTCAAAAATAGGAATTTATTTAGGAAAAAAGATTATGGATTGGGTTAATGGGGTCTACGGTAAAAAATATGCCCATT
TAAGAACCAAAAAATTTGAACAGGGTTTTGGGGAAGGAAAAGGTCTTGATGAGGTTGGATTAACACCACAAATCGTATCC
TGGATGGATAAAGCGATGGATGCTTACTGGAGAGACCGAATCTATGGGATTCTTGATCAAGTAGGAAAAGCTCCTTCAGC
AAGCGTATTAGATCTTTGGAATGAAATGCTGGTTGATATGTATGGTGAGGAATCGTCACGAAAAAATGTCATATATGAAA
TCGCTTTAAATGACGATCAGGTTAGCCCTGAGGCAAAAGCCTGGCTTAGAAATATTTTAGATTCCTAA

Upstream 100 bases:

>100_bases
CTCTTGGTAGGTTAGAAAAATAATGATTCAAGAAATTTTAAAAACTGCTTGACCCTATTGTTGCTATAGGCATTACCTTT
GTCTTGAAGGGGGAAACACA

Downstream 100 bases:

>100_bases
AAATATCAATAACACTGTTGGATCGGTATTGTTTTACCGATCCATTCAACTTGATTTGATACCTTCAATTATTAATTGAT
TTAGCATCTTAGGCAGACCA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Stationary-phase regulation of katG protein [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTQWFVKDLSQLTSVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFGFELSQIKTLLAEEGNALNHF
NSQARVLEQKASTLLDGAKTLRRIIDSVDKNQSIPWETIIQLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANA
TPEQKAAMENNWSQLVDEVKNNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVS
WMDKAMDAYWRDRIYGILDQVGKAPSASVLDLWNEMLVDMYGEESSRKNVIYEIALNDDQVSPEAKAWLRNILDS

Sequences:

>Translated_315_residues
MTQWFVKDLSQLTSVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFGFELSQIKTLLAEEGNALNHF
NSQARVLEQKASTLLDGAKTLRRIIDSVDKNQSIPWETIIQLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANA
TPEQKAAMENNWSQLVDEVKNNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVS
WMDKAMDAYWRDRIYGILDQVGKAPSASVLDLWNEMLVDMYGEESSRKNVIYEIALNDDQVSPEAKAWLRNILDS
>Mature_314_residues
TQWFVKDLSQLTSVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFGFELSQIKTLLAEEGNALNHFN
SQARVLEQKASTLLDGAKTLRRIIDSVDKNQSIPWETIIQLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANAT
PEQKAAMENNWSQLVDEVKNNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVSW
MDKAMDAYWRDRIYGILDQVGKAPSASVLDLWNEMLVDMYGEESSRKNVIYEIALNDDQVSPEAKAWLRNILDS

Specific function: Regulates the induction of katG (catalase-peroxidase) in stationary phase [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925 [H]

Pfam domain/function: PF00376 MerR; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 36279; Mature: 36148

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQWFVKDLSQLTSVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHC
FELSQIKTLLAEEGNALNHFNSQARVLEQKASTLLDGAKTLRRIIDSVDKNQSIPWETII
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANATPEQKAAMENNWSQLVDEVK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH
NNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVS
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
WMDKAMDAYWRDRIYGILDQVGKAPSASVLDLWNEMLVDMYGEESSRKNVIYEIALNDDQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
VSPEAKAWLRNILDS
CCHHHHHHHHHHHCC
>Mature Secondary Structure 
TQWFVKDLSQLTSVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHC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CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10498730 [H]