Click here to switch to the map view.

The map label for this gene is 52841832

Identifier: 52841832

GI number: 52841832

Start: 1770226

End: 1770903

Strand: Reverse

Name: 52841832

Synonym: lpg1604

Alternate gene names: NA

Gene position: 1770903-1770226 (Counterclockwise)

Preceding gene: 52841833

Following gene: 52841830

Centisome position: 52.12

GC content: 34.51

Gene sequence:

>678_bases
ATGTATTCCTATATAGATTTTAATGATAAAGTGCATAGACTAATACCTTCTAAATTCCCTCCCGTGACTTTATTCGATTG
GGCAGATTCTGCAGAAGAGCTCGAACAAATAGCGCTACTTGAAGGCTTAACCAATGAAAGGATACTTGCAGAGTTAGGTA
AAATAAATTTGATAGATCAAGAGGATTGGATTGGTGGTCCTGGATCTACTCCAATTATGGCTGCTTTTACACATACTGGA
TTTGAATCAAGATTTAGTGATGGCAGTTTTGGTATTTATTATGCCGCTTCATCTCTTGAGACAGCAATAAAGGAAACTTG
CTTTCATCGAGAACGGTTTTATAGCGCATCAAATGAAAAACCTTGCTCCATCTCAATGAGAGAGTATGTAGCTAATATAA
AAAAACCATTAATAGATATTACAGATAAAAGTTATAAAGACTTGTTTAATCCTGATCCTGCTTGTTATAGTAAAAGTCAG
GAATTTGGCAAGAAAATTTGTGAAAAGAAGGAATGGGGCTTGCTATATCCAAGTGTAAGAGATTTAAATGGCTTATGTGT
GGCTGTATTAAGACCTCCCGCGCTCACTATACCGATACAAGGATGCCATTTAAGATATATTTGGGATGGTGAAAAAATTT
CAGATATTTATAAAGAAAGTAAAATTACCAATATTTAA

Upstream 100 bases:

>100_bases
CCGTTTAAAGGTTTAACACCCAAAGAATATATGCTGGAAGGGGGGATGGTTCGTCTTGCAGATGTAAGGAAGTTTCTGGA
CTTTTGGCGAGGTTATTAGG

Downstream 100 bases:

>100_bases
GATATTTTTCCCAAATTGTGGCTAGATGACTTTCTCATTAATGATGCAAATGCATTAAACGAAAGAGGTATCAATCTATC
TTTTTCCCAGTTGGCTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAELGKINLIDQEDWIGGPGSTPIMAAFTHTG
FESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEKPCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQ
EFGKKICEKKEWGLLYPSVRDLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI

Sequences:

>Translated_225_residues
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAELGKINLIDQEDWIGGPGSTPIMAAFTHTG
FESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEKPCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQ
EFGKKICEKKEWGLLYPSVRDLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI
>Mature_225_residues
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAELGKINLIDQEDWIGGPGSTPIMAAFTHTG
FESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEKPCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQ
EFGKKICEKKEWGLLYPSVRDLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25582; Mature: 25582

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAELGKINLIDQ
CCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEECC
EDWIGGPGSTPIMAAFTHTGFESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEK
CCCCCCCCCCCEEEEEECCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC
PCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQEFGKKICEKKEWGLLYPSVR
CCEEEHHHHHHHHHHHHEECCCCHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCEECCCCC
DLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI
CCCCEEEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAELGKINLIDQ
CCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEECC
EDWIGGPGSTPIMAAFTHTGFESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEK
CCCCCCCCCCCEEEEEECCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC
PCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQEFGKKICEKKEWGLLYPSVR
CCEEEHHHHHHHHHHHHEECCCCHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCEECCCCC
DLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI
CCCCEEEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]