| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
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The map label for this gene is yfcX
Identifier: 52841826
GI number: 52841826
Start: 1762019
End: 1764037
Strand: Reverse
Name: yfcX
Synonym: lpg1596
Alternate gene names: 52841826
Gene position: 1764037-1762019 (Counterclockwise)
Preceding gene: 52841827
Following gene: 52841825
Centisome position: 51.92
GC content: 40.66
Gene sequence:
>2019_bases ATGAATAATTATAAACATTGGGATTTACAACGAGATAAAGACGCCATTCTGTGGCTTGGATTAAATAGAAGGGATGCTGC TGTTAATAGCATTAATGAAGAAGTCCTGGATGAGTTAAACAGCTTGCTGCATGAAATATCGCATGATAAAAAAGCAATGG GATTAATTATTTATTCGCTCAAGGAAAAAGGGTTTATTGCGGGTGCTGATGTTAACGCTTTTTCACAATTTGAGAGCTCT TCACAAGCGGTTGATTTTTTGCAGAAAGGACAAACTGTATTTGCTCGGTTGCAAGCTTTATCAATTCCAAGTGTCGCAAT GATCGATGGTTTTTGCATGGGCGGTGGTTATGAGTTAGCTTTAGCCTGCACCTACCGAATCGCAACGGATGACAAAGACA CACGTATTGGTTTGCCTGAAGTAATGCTGGGTATTCATCCAGGGTGGGGCGGTACTGTGCGTTTGCCTCAGTTAATAGGT GGTTTTAAAGCTTTATCACAAGTCATATTAACCGGTAGTGCAATACCTGCTGCAAAAGCTAAAAGCCTCGGTATGATTGA TGAGGTAGTACCTGTTCGTCAGCTAAGAAGGGCTGCTGTTTATTTCATAAAGAATAAACCACCACGACACAGGGCATCAT TTATTGAAAGTTTAACGAATAGCTCTCTGCTCAGAAAAGCTATCGCTTATTTACTGCGTTATAACGTAGCCAAGCGAGTT CGAAAAGAACATTATCCTGCACCATATGCCGTGATTGACCTGTGGGAAAAAGAAGGAGGAGTGGGAGAGAGGGCTTATCT TAAAGAAGTGGACTCTATAGAAAAACTTGTATCCCAAAATGATACCGCCAAGAATCTTATCAGAGCATTTTTATTGCGTG AGCGATTAAAAGGGTTCGCCAAAGACAGCCATTTCAAAGCGACCCATGTTCATGTGATTGGAGCAGGGGTTATGGGAGGG GATATCGCTGCCTGGTGTGCTTTGCGAGGTCTTCAGGTCACATTACAGGATAAGTCTTATGAACAAATTGCCCCTGCAAT AGGGAGGGCACATAAACTTTATAGCAAAAAACTGCGTAAGCCTCGATTGATCCAGGCCGCAATGGATAGATTAATTGCAG ATCCCCATGGGCATGGGGTAAAACGAGCAGATGTCATTATTGAGGCTGTTTTCGAGAATTTGGTTGTTAAGCATGAAATA ATGAAAACTGTGGAAAAAAATGCCAAAAAAGATGCGATCATAGCGACAAACACCTCTAGTATCCCACTTGATGAAATCAG CAGTGTAATGAGTAAACCAGAACGCTTGGTAGGCATTCATTTCTTTAATCCTGTAGCTAAAATGGATTTGGTAGAAATAG TCAGCAGCTCATCTACTACAAAAAAAGTTCAGCAGAGCGCTTGCGCGTTCGTCAATCAAATTGGCAAATTGCCTTTGCCT GTCAAATCAAGCCCTGGATTTTTAATAAATAGAGTGCTCATGCCTTACCTGATGGAGTGCGTACAGTTATTGGATGAAGG ATATAGTGCGGAGACAATAGATGAGGCCGCATTACAGTTTGGTATGTTTATGGGCCCTGTTGAACTGGCTGATACAGTAG GAATGGATGTTTGTCTTGCTGTGGCTGAAAATCTGACCAGTCACTTTGGTGGTACTATTCCACAAAGATTACGTGATTTA GTAAAAGAAGGTAAGCTAGGCAGAAAAACTGGAGAAGGTTTTTATAAATATAAAAATGGAAAAGTAATTAAGAAAAAGGC TCCATCACATGTCGATAAAACCATTGCAGACAGATTAATTTTGCGCATGGTGAATGAATCTGCAGCTTGTATACGTGAGA AAGTGGTTGAAGATTCTGACTTGTTGGATGCTGGAATGATCTTTGCCACAGGTTTTGCTCCATTCCGTGGAGGGCCTATG AATTACGCAAATGATTTTGGTAAAGATAAACTGGAAACTTTATTTAAAACATTTGAATCTAAATACGGCGAACGTTTTAA GGTAGATACCAGCTTATAA
Upstream 100 bases:
>100_bases TTAGAGCAAAGAAATGAGTCGCGAGGTATGGCAGCAATTTGTATCGGAGGTGGTCAGGGAGGAGCTATGTATCTTGAACG AGTTACTGAGGTGAAAGGAC
Downstream 100 bases:
>100_bases TTTCTCTGCAAGGTAAGACGTTATGGTTTTACCTTGCTTTTTAGAGAGAAAAGCATCATATGGAGCAAAAATCAAAATCT ATAATAAGAGTTTGGTATTT
Product: enoyl CoA hydratase
Products: NA
Alternate protein names: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase [H]
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MNNYKHWDLQRDKDAILWLGLNRRDAAVNSINEEVLDELNSLLHEISHDKKAMGLIIYSLKEKGFIAGADVNAFSQFESS SQAVDFLQKGQTVFARLQALSIPSVAMIDGFCMGGGYELALACTYRIATDDKDTRIGLPEVMLGIHPGWGGTVRLPQLIG GFKALSQVILTGSAIPAAKAKSLGMIDEVVPVRQLRRAAVYFIKNKPPRHRASFIESLTNSSLLRKAIAYLLRYNVAKRV RKEHYPAPYAVIDLWEKEGGVGERAYLKEVDSIEKLVSQNDTAKNLIRAFLLRERLKGFAKDSHFKATHVHVIGAGVMGG DIAAWCALRGLQVTLQDKSYEQIAPAIGRAHKLYSKKLRKPRLIQAAMDRLIADPHGHGVKRADVIIEAVFENLVVKHEI MKTVEKNAKKDAIIATNTSSIPLDEISSVMSKPERLVGIHFFNPVAKMDLVEIVSSSSTTKKVQQSACAFVNQIGKLPLP VKSSPGFLINRVLMPYLMECVQLLDEGYSAETIDEAALQFGMFMGPVELADTVGMDVCLAVAENLTSHFGGTIPQRLRDL VKEGKLGRKTGEGFYKYKNGKVIKKKAPSHVDKTIADRLILRMVNESAACIREKVVEDSDLLDAGMIFATGFAPFRGGPM NYANDFGKDKLETLFKTFESKYGERFKVDTSL
Sequences:
>Translated_672_residues MNNYKHWDLQRDKDAILWLGLNRRDAAVNSINEEVLDELNSLLHEISHDKKAMGLIIYSLKEKGFIAGADVNAFSQFESS SQAVDFLQKGQTVFARLQALSIPSVAMIDGFCMGGGYELALACTYRIATDDKDTRIGLPEVMLGIHPGWGGTVRLPQLIG GFKALSQVILTGSAIPAAKAKSLGMIDEVVPVRQLRRAAVYFIKNKPPRHRASFIESLTNSSLLRKAIAYLLRYNVAKRV RKEHYPAPYAVIDLWEKEGGVGERAYLKEVDSIEKLVSQNDTAKNLIRAFLLRERLKGFAKDSHFKATHVHVIGAGVMGG DIAAWCALRGLQVTLQDKSYEQIAPAIGRAHKLYSKKLRKPRLIQAAMDRLIADPHGHGVKRADVIIEAVFENLVVKHEI MKTVEKNAKKDAIIATNTSSIPLDEISSVMSKPERLVGIHFFNPVAKMDLVEIVSSSSTTKKVQQSACAFVNQIGKLPLP VKSSPGFLINRVLMPYLMECVQLLDEGYSAETIDEAALQFGMFMGPVELADTVGMDVCLAVAENLTSHFGGTIPQRLRDL VKEGKLGRKTGEGFYKYKNGKVIKKKAPSHVDKTIADRLILRMVNESAACIREKVVEDSDLLDAGMIFATGFAPFRGGPM NYANDFGKDKLETLFKTFESKYGERFKVDTSL >Mature_672_residues MNNYKHWDLQRDKDAILWLGLNRRDAAVNSINEEVLDELNSLLHEISHDKKAMGLIIYSLKEKGFIAGADVNAFSQFESS SQAVDFLQKGQTVFARLQALSIPSVAMIDGFCMGGGYELALACTYRIATDDKDTRIGLPEVMLGIHPGWGGTVRLPQLIG GFKALSQVILTGSAIPAAKAKSLGMIDEVVPVRQLRRAAVYFIKNKPPRHRASFIESLTNSSLLRKAIAYLLRYNVAKRV RKEHYPAPYAVIDLWEKEGGVGERAYLKEVDSIEKLVSQNDTAKNLIRAFLLRERLKGFAKDSHFKATHVHVIGAGVMGG DIAAWCALRGLQVTLQDKSYEQIAPAIGRAHKLYSKKLRKPRLIQAAMDRLIADPHGHGVKRADVIIEAVFENLVVKHEI MKTVEKNAKKDAIIATNTSSIPLDEISSVMSKPERLVGIHFFNPVAKMDLVEIVSSSSTTKKVQQSACAFVNQIGKLPLP VKSSPGFLINRVLMPYLMECVQLLDEGYSAETIDEAALQFGMFMGPVELADTVGMDVCLAVAENLTSHFGGTIPQRLRDL VKEGKLGRKTGEGFYKYKNGKVIKKKAPSHVDKTIADRLILRMVNESAACIREKVVEDSDLLDAGMIFATGFAPFRGGPM NYANDFGKDKLETLFKTFESKYGERFKVDTSL
Specific function: Catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities [H]
COG id: COG1250
COG function: function code I; 3-hydroxyacyl-CoA dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the central section; belongs to the 3-hydroxyacyl- CoA dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI20127408, Length=695, Percent_Identity=32.8057553956835, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI68989263, Length=699, Percent_Identity=28.6123032904149, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI261878539, Length=604, Percent_Identity=28.6423841059603, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI296179429, Length=294, Percent_Identity=37.0748299319728, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI296179427, Length=312, Percent_Identity=34.9358974358974, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI194097323, Length=233, Percent_Identity=28.755364806867, Blast_Score=91, Evalue=5e-18, Organism=Homo sapiens, GI213417737, Length=213, Percent_Identity=29.5774647887324, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI157694516, Length=213, Percent_Identity=29.5774647887324, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI157694520, Length=176, Percent_Identity=30.6818181818182, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI62530384, Length=212, Percent_Identity=31.1320754716981, Blast_Score=80, Evalue=9e-15, Organism=Homo sapiens, GI4502327, Length=186, Percent_Identity=34.9462365591398, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1788682, Length=681, Percent_Identity=32.0117474302496, Blast_Score=333, Evalue=2e-92, Organism=Escherichia coli, GI1790281, Length=675, Percent_Identity=29.4814814814815, Blast_Score=290, Evalue=2e-79, Organism=Escherichia coli, GI1787661, Length=279, Percent_Identity=36.2007168458781, Blast_Score=164, Evalue=2e-41, Organism=Escherichia coli, GI1787659, Length=176, Percent_Identity=35.2272727272727, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI221142681, Length=237, Percent_Identity=29.1139240506329, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17508951, Length=687, Percent_Identity=32.0232896652111, Blast_Score=318, Evalue=5e-87, Organism=Caenorhabditis elegans, GI17508953, Length=687, Percent_Identity=32.0232896652111, Blast_Score=318, Evalue=7e-87, Organism=Caenorhabditis elegans, GI17558304, Length=683, Percent_Identity=30.0146412884334, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI25144276, Length=603, Percent_Identity=32.5041459369818, Blast_Score=282, Evalue=5e-76, Organism=Caenorhabditis elegans, GI71985930, Length=379, Percent_Identity=29.8153034300792, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17553560, Length=289, Percent_Identity=36.3321799307958, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71985923, Length=357, Percent_Identity=31.0924369747899, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17549919, Length=289, Percent_Identity=36.6782006920415, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17563036, Length=291, Percent_Identity=36.0824742268041, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17540714, Length=185, Percent_Identity=32.4324324324324, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25145438, Length=188, Percent_Identity=32.4468085106383, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17554946, Length=190, Percent_Identity=31.0526315789474, Blast_Score=86, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17560910, Length=185, Percent_Identity=28.1081081081081, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17534483, Length=191, Percent_Identity=24.0837696335079, Blast_Score=67, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=191, Percent_Identity=26.7015706806283, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19921000, Length=712, Percent_Identity=33.1460674157303, Blast_Score=325, Evalue=7e-89, Organism=Drosophila melanogaster, GI24583077, Length=712, Percent_Identity=33.1460674157303, Blast_Score=324, Evalue=1e-88, Organism=Drosophila melanogaster, GI24583079, Length=712, Percent_Identity=33.1460674157303, Blast_Score=324, Evalue=1e-88, Organism=Drosophila melanogaster, GI24653139, Length=187, Percent_Identity=34.2245989304813, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI20129971, Length=182, Percent_Identity=36.8131868131868, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI24653477, Length=182, Percent_Identity=36.8131868131868, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI28571729, Length=137, Percent_Identity=32.8467153284672, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571730, Length=137, Percent_Identity=32.8467153284672, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650670, Length=181, Percent_Identity=31.4917127071823, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357171, Length=190, Percent_Identity=28.4210526315789, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006180 - InterPro: IPR006176 - InterPro: IPR006108 - InterPro: IPR008927 - InterPro: IPR001753 - InterPro: IPR013328 - InterPro: IPR018376 - InterPro: IPR012802 - InterPro: IPR016040 [H]
Pfam domain/function: PF00725 3HCDH; PF02737 3HCDH_N; PF00378 ECH [H]
EC number: =4.2.1.17; =5.1.2.3; =1.1.1.35 [H]
Molecular weight: Translated: 74371; Mature: 74371
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS00067 3HCDH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYKHWDLQRDKDAILWLGLNRRDAAVNSINEEVLDELNSLLHEISHDKKAMGLIIYSL CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEE KEKGFIAGADVNAFSQFESSSQAVDFLQKGQTVFARLQALSIPSVAMIDGFCMGGGYELA CCCCEEECCCCHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCCHHHHCCEECCCCEEEE LACTYRIATDDKDTRIGLPEVMLGIHPGWGGTVRLPQLIGGFKALSQVILTGSAIPAAKA EEEEEEEECCCCCCCCCCHHHHHEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHH KSLGMIDEVVPVRQLRRAAVYFIKNKPPRHRASFIESLTNSSLLRKAIAYLLRYNVAKRV HHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKEHYPAPYAVIDLWEKEGGVGERAYLKEVDSIEKLVSQNDTAKNLIRAFLLRERLKGFA HHHCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH KDSHFKATHVHVIGAGVMGGDIAAWCALRGLQVTLQDKSYEQIAPAIGRAHKLYSKKLRK CCCCCCEEEEEEEECCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC PRLIQAAMDRLIADPHGHGVKRADVIIEAVFENLVVKHEIMKTVEKNAKKDAIIATNTSS CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC IPLDEISSVMSKPERLVGIHFFNPVAKMDLVEIVSSSSTTKKVQQSACAFVNQIGKLPLP CCHHHHHHHHCCHHHEEEEHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC VKSSPGFLINRVLMPYLMECVQLLDEGYSAETIDEAALQFGMFMGPVELADTVGMDVCLA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VAENLTSHFGGTIPQRLRDLVKEGKLGRKTGEGFYKYKNGKVIKKKAPSHVDKTIADRLI HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHH LRMVNESAACIREKVVEDSDLLDAGMIFATGFAPFRGGPMNYANDFGKDKLETLFKTFES HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHH KYGERFKVDTSL HCCCEEEECCCC >Mature Secondary Structure MNNYKHWDLQRDKDAILWLGLNRRDAAVNSINEEVLDELNSLLHEISHDKKAMGLIIYSL CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEE KEKGFIAGADVNAFSQFESSSQAVDFLQKGQTVFARLQALSIPSVAMIDGFCMGGGYELA CCCCEEECCCCHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCCHHHHCCEECCCCEEEE LACTYRIATDDKDTRIGLPEVMLGIHPGWGGTVRLPQLIGGFKALSQVILTGSAIPAAKA EEEEEEEECCCCCCCCCCHHHHHEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHH KSLGMIDEVVPVRQLRRAAVYFIKNKPPRHRASFIESLTNSSLLRKAIAYLLRYNVAKRV HHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKEHYPAPYAVIDLWEKEGGVGERAYLKEVDSIEKLVSQNDTAKNLIRAFLLRERLKGFA HHHCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH KDSHFKATHVHVIGAGVMGGDIAAWCALRGLQVTLQDKSYEQIAPAIGRAHKLYSKKLRK CCCCCCEEEEEEEECCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC PRLIQAAMDRLIADPHGHGVKRADVIIEAVFENLVVKHEIMKTVEKNAKKDAIIATNTSS CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC IPLDEISSVMSKPERLVGIHFFNPVAKMDLVEIVSSSSTTKKVQQSACAFVNQIGKLPLP CCHHHHHHHHCCHHHEEEEHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC VKSSPGFLINRVLMPYLMECVQLLDEGYSAETIDEAALQFGMFMGPVELADTVGMDVCLA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VAENLTSHFGGTIPQRLRDLVKEGKLGRKTGEGFYKYKNGKVIKKKAPSHVDKTIADRLI HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHH LRMVNESAACIREKVVEDSDLLDAGMIFATGFAPFRGGPMNYANDFGKDKLETLFKTFES HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHH KYGERFKVDTSL HCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA