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The map label for this gene is 52841794

Identifier: 52841794

GI number: 52841794

Start: 1730285

End: 1731028

Strand: Reverse

Name: 52841794

Synonym: lpg1564

Alternate gene names: NA

Gene position: 1731028-1730285 (Counterclockwise)

Preceding gene: 52841800

Following gene: 52841793

Centisome position: 50.95

GC content: 36.16

Gene sequence:

>744_bases
ATGGAGAAAGGATCTGCTATGGAAAATTTAGAGCATGGACATTCGCAAAAAGAAATCAGAGATCGATTAGCACAGGTCCC
ATCTCAAAATTACTTGCGAGATTGGATATATGGAGGAATTGATGGTGTTGTCACTACTTTTGCCATTGTTTCTGGTGTTG
TAGGTGGACAACTATCTTCTTTAGTTATTCTAATTTTAGGTTTTGCCAACTTGCTTGCTGATGGGTTTTCAATGGCGGCA
AGTAATTATCTGGGTACCAAATCTGAGGTCGATCAATTTCAGCGTTATAAAACAATTGAAGAAAAACATATTGATTTTAT
TCCAGAGGGTGAAAAAAACGAAATAAAACAAATTTTTCAAAATAAAGGTTTGCATGGCCAAACATTGGATCAAGTTGTTG
AGGAAATTACAGCGAACAGAGCATTATGGATAAAAACCATGTTACAAGAAGAATATGGGTTGCCTGCTACACTTCGATTC
CCGCTTAAATCTGCGCTTTATACTTTTAGTGCGTTTCTACTTTTTGGAATTATTCCATTAATTCCTTACGTGCTGGTCAT
GAACAATTCGTTCATCTGGTCTTGTTTTTTCACTGCAATTACATTTTTTGTCATCGGCTCAATCAAAAGCCACTGGTCAA
CCAAATCCTGGTTATATTCCGGTTTTGAGACACTAATAATTGGCACTGTAACAGCCTCTCTATCTTATGGTATTGGACTA
TTTTTACATCATTATCTGACTTAA

Upstream 100 bases:

>100_bases
ATTTCCCGACACCCCGCGCCATCTAACAAACTCAAATATACTAAATTTTATTATATGCTTTGTCAAACTAGCGATAATAT
TGGCAGAATAAATAACACAT

Downstream 100 bases:

>100_bases
AATACGGCATGGATCTGCTGCTTTCATCCTATAATCCCAATGGATGCTTTTGTTAGATAGGAATTTTGTAGTTAATTATA
TAAGGTCATGCTAGAAATGA

Product: integral membrane protein

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Transmembrane Protein; Ferritin-Like Domain Fused ; CCC1-Related Iron/Manganese Transporter Component

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MEKGSAMENLEHGHSQKEIRDRLAQVPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAA
SNYLGTKSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQTLDQVVEEITANRALWIKTMLQEEYGLPATLRF
PLKSALYTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGL
FLHHYLT

Sequences:

>Translated_247_residues
MEKGSAMENLEHGHSQKEIRDRLAQVPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAA
SNYLGTKSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQTLDQVVEEITANRALWIKTMLQEEYGLPATLRF
PLKSALYTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGL
FLHHYLT
>Mature_247_residues
MEKGSAMENLEHGHSQKEIRDRLAQVPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAA
SNYLGTKSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQTLDQVVEEITANRALWIKTMLQEEYGLPATLRF
PLKSALYTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGL
FLHHYLT

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27750; Mature: 27750

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCC
>Mature Secondary Structure
MEKGSAMENLEHGHSQKEIRDRLAQVPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSS
CCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LVILILGFANLLADGFSMAASNYLGTKSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQ
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
NKGLHGQTLDQVVEEITANRALWIKTMLQEEYGLPATLRFPLKSALYTFSAFLLFGIIPL
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
IPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLHHYLT
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA