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The map label for this gene is accD

Identifier: 52841571

GI number: 52841571

Start: 1479974

End: 1480858

Strand: Direct

Name: accD

Synonym: lpg1341

Alternate gene names: 52841571

Gene position: 1479974-1480858 (Clockwise)

Preceding gene: 52841558

Following gene: 52841572

Centisome position: 43.56

GC content: 41.69

Gene sequence:

>885_bases
ATGAGCTGGCTTAAAAAACTGTTACCATCAAGAATAAGGACAGAAACCTCTCAAAAGAAGGGGGTTCCGGAAGGTTTATG
GGTTAAATGTTCTGGTTGTAATGAAGTGCTTTACAGTACTGAACTGGCAAAAAATTTTATGGTTTGCCCATCTTGTAATT
TTCATCATCGCATTTCCGCACGCTTGAGAATCGCTCAATTTCTAGATGAGTCAGGGCAAGAAGAAGTGGCTGCTGGGCTG
GAGCCACAGGACAGATTAAAATTCAGGGACTCCAAAAAATACAAGGATAGAATTTCTCAAGCGCAAAAAGCGACAGGAGA
GAAAGAGGCATTAATTGTTGTTAAAGGGTTTTTAATGCAGCAACCAGTGGTTGTTAGTGCCTTTGAGTTTAATTTTATGG
GCGGCTCCATGGGAGCGACGGTTGGAGAAAAATTTGTAAGGGCAGTGAATGTTGCTGCAACAGAAAAGCGACCATACATT
TGTTTTACTGCCAGCGGCGGTGCTCGCATGCAGGAGGGATTATTTTCTTTAATGCAAATGGCTAAAACATCAGCAGCTTT
AGCAAAATTTGCTGAAACCGGGTTGCCTTTTATTGTTGTGTTAACCGATCCAACGATGGGTGGAGTATCAGCTAGTTTTG
GCAGTCTTGGTGATATAATTATTGCTGAACCCAATGCTTTAATTGGTTTTGCTGGGCCAAGAGTGATTGAGCAAACTGTT
AGACAAACTTTGCCAGAAGGCTTTCAACGAAGTGAGTTTTTACTGGAGCATGGACATATTGATATGATAGTTGAACGTAA
ACATCTTCGAGCAACTATATCCGAATTGGTTTCCAAATTGACTCATAAAGGAGCGGAGAGTTTTTTTGCACGCGCCATGG
AGTGA

Upstream 100 bases:

>100_bases
ATCTTATTCCTTTATGTGAAATTCAAGTCCAATATAGACATGTCAGATTATTTTTTTCTGTGTATAATAATCCGATTTGA
TAATATCTGGGTTCTAATTT

Downstream 100 bases:

>100_bases
ATGGGATTTAAATCACTGGTTGACTCATTTGGAAACCAGAAATACCCAGGAAATACAGCTTGGTTTGACCAGAGTTTTGA
CTGTAGCGCAGAAATTAAAT

Product: acetyl CoA carboxylase, carboxyltransferase, beta subunit

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSWLKKLLPSRIRTETSQKKGVPEGLWVKCSGCNEVLYSTELAKNFMVCPSCNFHHRISARLRIAQFLDESGQEEVAAGL
EPQDRLKFRDSKKYKDRISQAQKATGEKEALIVVKGFLMQQPVVVSAFEFNFMGGSMGATVGEKFVRAVNVAATEKRPYI
CFTASGGARMQEGLFSLMQMAKTSAALAKFAETGLPFIVVLTDPTMGGVSASFGSLGDIIIAEPNALIGFAGPRVIEQTV
RQTLPEGFQRSEFLLEHGHIDMIVERKHLRATISELVSKLTHKGAESFFARAME

Sequences:

>Translated_294_residues
MSWLKKLLPSRIRTETSQKKGVPEGLWVKCSGCNEVLYSTELAKNFMVCPSCNFHHRISARLRIAQFLDESGQEEVAAGL
EPQDRLKFRDSKKYKDRISQAQKATGEKEALIVVKGFLMQQPVVVSAFEFNFMGGSMGATVGEKFVRAVNVAATEKRPYI
CFTASGGARMQEGLFSLMQMAKTSAALAKFAETGLPFIVVLTDPTMGGVSASFGSLGDIIIAEPNALIGFAGPRVIEQTV
RQTLPEGFQRSEFLLEHGHIDMIVERKHLRATISELVSKLTHKGAESFFARAME
>Mature_293_residues
SWLKKLLPSRIRTETSQKKGVPEGLWVKCSGCNEVLYSTELAKNFMVCPSCNFHHRISARLRIAQFLDESGQEEVAAGLE
PQDRLKFRDSKKYKDRISQAQKATGEKEALIVVKGFLMQQPVVVSAFEFNFMGGSMGATVGEKFVRAVNVAATEKRPYIC
FTASGGARMQEGLFSLMQMAKTSAALAKFAETGLPFIVVLTDPTMGGVSASFGSLGDIIIAEPNALIGFAGPRVIEQTVR
QTLPEGFQRSEFLLEHGHIDMIVERKHLRATISELVSKLTHKGAESFFARAME

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=282, Percent_Identity=60.9929078014184, Blast_Score=360, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 32400; Mature: 32269

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLKKLLPSRIRTETSQKKGVPEGLWVKCSGCNEVLYSTELAKNFMVCPSCNFHHRISA
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCEEECCCCCCHHHHHH
RLRIAQFLDESGQEEVAAGLEPQDRLKFRDSKKYKDRISQAQKATGEKEALIVVKGFLMQ
HHHHHHHHCCCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHC
QPVVVSAFEFNFMGGSMGATVGEKFVRAVNVAATEKRPYICFTASGGARMQEGLFSLMQM
CCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHH
AKTSAALAKFAETGLPFIVVLTDPTMGGVSASFGSLGDIIIAEPNALIGFAGPRVIEQTV
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHH
RQTLPEGFQRSEFLLEHGHIDMIVERKHLRATISELVSKLTHKGAESFFARAME
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SWLKKLLPSRIRTETSQKKGVPEGLWVKCSGCNEVLYSTELAKNFMVCPSCNFHHRISA
CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCEEECCCCCCHHHHHH
RLRIAQFLDESGQEEVAAGLEPQDRLKFRDSKKYKDRISQAQKATGEKEALIVVKGFLMQ
HHHHHHHHCCCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHC
QPVVVSAFEFNFMGGSMGATVGEKFVRAVNVAATEKRPYICFTASGGARMQEGLFSLMQM
CCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHH
AKTSAALAKFAETGLPFIVVLTDPTMGGVSASFGSLGDIIIAEPNALIGFAGPRVIEQTV
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHH
RQTLPEGFQRSEFLLEHGHIDMIVERKHLRATISELVSKLTHKGAESFFARAME
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA