Click here to switch to the map view.

The map label for this gene is fliS

Identifier: 52841567

GI number: 52841567

Start: 1475663

End: 1476073

Strand: Reverse

Name: fliS

Synonym: lpg1337

Alternate gene names: 52841567

Gene position: 1476073-1475663 (Counterclockwise)

Preceding gene: 52841568

Following gene: 52841566

Centisome position: 43.44

GC content: 35.28

Gene sequence:

>411_bases
ATGAGAATGAAAAACCTATATTCACAAATTTCCAGCCAATACAAAGCCATAGAGCTACAAACCCGCATAGAAACAGCCTC
CCCTCATGAACTTATAGATTTATTACTTCAAGGAGCCCGATCTCACATTGCTACTGCTCAGGGTAATATACAGCGTAACC
AAATTAAAGAAAAAGGAGAACATATTGGCAAAGCCATTAGCATCATTGAAGGTTTAAAAATGAGTCTCAATCATGATAAA
GGTGGCGAAATTGCCGAAAATTTACTCCAGTTATATGATTATGTTCAACAAATACTACTTAAAGCCAATTTAAAAAATGA
TGAAGATTTATTAGCTCAGTCCAATATGTTATTAGCTGAAGTGCATCAAGCCTGGCAAGCGATTAACTCTAATGCTGGTA
ATGAACTTTAA

Upstream 100 bases:

>100_bases
TGCTCTGGACACTCTACTCAGCCAATTACAAAGCACTAGTGTTTTTCTATCCCAGCAATTAGCCAATTTACCCCAATTAA
AATTGAAATAATAGGAGGTA

Downstream 100 bases:

>100_bases
TATTTGCAATGAGCTCCCATGATTCAGCATTTGCTTTTTACAGCTTTATAGCAACCAAAATAAGAGTTTTCTTGATTTGG
CAATTATTAAACCCAGTCCA

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRMKNLYSQISSQYKAIELQTRIETASPHELIDLLLQGARSHIATAQGNIQRNQIKEKGEHIGKAISIIEGLKMSLNHDK
GGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAEVHQAWQAINSNAGNEL

Sequences:

>Translated_136_residues
MRMKNLYSQISSQYKAIELQTRIETASPHELIDLLLQGARSHIATAQGNIQRNQIKEKGEHIGKAISIIEGLKMSLNHDK
GGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAEVHQAWQAINSNAGNEL
>Mature_136_residues
MRMKNLYSQISSQYKAIELQTRIETASPHELIDLLLQGARSHIATAQGNIQRNQIKEKGEHIGKAISIIEGLKMSLNHDK
GGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAEVHQAWQAINSNAGNEL

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=114, Percent_Identity=34.2105263157895, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 15260; Mature: 15260

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKNLYSQISSQYKAIELQTRIETASPHELIDLLLQGARSHIATAQGNIQRNQIKEKGE
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HIGKAISIIEGLKMSLNHDKGGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VHQAWQAINSNAGNEL
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRMKNLYSQISSQYKAIELQTRIETASPHELIDLLLQGARSHIATAQGNIQRNQIKEKGE
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HIGKAISIIEGLKMSLNHDKGGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VHQAWQAINSNAGNEL
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]