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The map label for this gene is 52841531

Identifier: 52841531

GI number: 52841531

Start: 1429177

End: 1429644

Strand: Reverse

Name: 52841531

Synonym: lpg1300

Alternate gene names: NA

Gene position: 1429644-1429177 (Counterclockwise)

Preceding gene: 52841532

Following gene: 52841529

Centisome position: 42.08

GC content: 37.18

Gene sequence:

>468_bases
ATGCTCTATTTCTATTTAAAGTTTATCCACGTGCTGAGTTCAACGATACTTTTTGGTACAGGTATAGGAACAGCAAGTGT
GATGATTTATGGCCATAGAACAAAAAATCCGATTGTTATTGCTGCCATTTCAAAATATGTGGTTTTTGCTGATTGGATAT
TCACTGGTACATCTGGAATATTACAACCACTCACAGGGTTTGCCATGATTTACCTTGCTGGATTTTCTTGGACTTCTTTA
TGGATACTGGGATCAATTCTTGGATATGTCGTTGCGGCATGTTGTTGGTTTCCTGTCGTCTGCCTGCAAATCAAAATGAG
GGATCTAGCCATAGAGACCGTAAAAAATAACACTACTTTACCAGAGAAATATCACCGATATTTTCTTTATTGGTTTATTC
TGGGTTGGCCGGCATTCTTAAGCCTTATTGGAGTATTTTATTTGATGACTAATAAGCCTGTCTTTTAA

Upstream 100 bases:

>100_bases
AACTGCCTTACCTTTGGTTAGATCCATTTGCTCCCATAGCCAAGAACATTCCTTTGTTAATAGCTATTTTAATAGGTCTG
GGTTTGGAGTCTGATAAATA

Downstream 100 bases:

>100_bases
ATAGCAAAGACGAATATTAAGAGATTGGGTGGTCGTAATTTTTGTGTTATTTGTTACTTTAATTGTTCCAGTAACTGCCT
GGCTTGCTCTTTTTGATTGG

Product: integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein; Integral Membrane Protein-Like; Transmembrane Protein; Integral Membrane-Like Protein; Exonuclease VII Large Subunit

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGILQPLTGFAMIYLAGFSWTSL
WILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTLPEKYHRYFLYWFILGWPAFLSLIGVFYLMTNKPVF

Sequences:

>Translated_155_residues
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGILQPLTGFAMIYLAGFSWTSL
WILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTLPEKYHRYFLYWFILGWPAFLSLIGVFYLMTNKPVF
>Mature_155_residues
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGILQPLTGFAMIYLAGFSWTSL
WILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTLPEKYHRYFLYWFILGWPAFLSLIGVFYLMTNKPVF

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17636; Mature: 17636

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGI
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCHHH
LQPLTGFAMIYLAGFSWTSLWILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PEKYHRYFLYWFILGWPAFLSLIGVFYLMTNKPVF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGI
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCHHH
LQPLTGFAMIYLAGFSWTSLWILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PEKYHRYFLYWFILGWPAFLSLIGVFYLMTNKPVF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA