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The map label for this gene is sfcA

Identifier: 52841511

GI number: 52841511

Start: 1408223

End: 1409947

Strand: Reverse

Name: sfcA

Synonym: lpg1280

Alternate gene names: 52841511

Gene position: 1409947-1408223 (Counterclockwise)

Preceding gene: 52841516

Following gene: 52841507

Centisome position: 41.5

GC content: 40.46

Gene sequence:

>1725_bases
ATGCTTGATTTTAGTTTGAATCGTGATCCCCAAACGGGCGAGTTATACATAGAAACCTCATTATGTGGGAAGCCTTTACT
GACTACACCGCAATTAAACAAAGGAACAGCATTTACTCAGGAAGAAAGAAAAGATTTCGGTCTTTTAGGCAAGTTACCAC
ACCGCGTAGAAACTCTTGATGAACAAGTAAAACGTGCCTATCTTCAATATTCAAGTTACACGACACGTTTGCAGCAACAT
ATTTATTTGAATAATTTACATGATAAAAACCAAATAGTATTTTACAAACTGCTAAGTCGTCATTTGGGGGAAATGCTTCC
CATCATCTATACACCAATCGTTGGTGCTGCAGCCAAGAGGTTTAGTCATGAATACAGACAGCCACGAGGATTGTATATTG
CTCATTCGGATAAAAACCAGCTTGAGGAAATAATTAATAACCGTTCGAATCCAGACATAGACCTTGTTGTAGTGACCGAT
GGTGAGGGAGTCCTAGGCATTGGCGATCAAGGGATAGGAGGAATGGATATACCTGTTGCAAAACTAATGGTTTACAGCTT
ATGTGGTGGGATTGATCCAACTCGCACATTACCCATATTTCTTGATGTAGGAACTAACAACCAAGAATTATTAAATGACC
CTATGTATCTGGGTTGCCGTCACCCCAGAATAAAAAGCTCAGAATACGACGATTTTATCAAAACTTTTGTCAATGAAATT
CATAAGCAATTTCCAAATGCTTTTTTACATTGGGAAGACTTTGGTCGAGGCAATGCTCGACGAATCCTGGATCAATTTCA
AGATGAATTGTGTACTTTTAATGATGATATTCAGGGAACTGGTGCAGTAACTCTGGCAGCAATTTTGGCAGCATGTGATG
TAACTGGACTACCCTTACATGAACACAGAATCGTTGTGTTTGGAGCTGGCTCAGCAGGTACTGGTATTAGCGACCAAATT
GTTGATGCGATGGTGAAAAGCGGATTGAGCCTAACTGATGCTTATGACAGATTCTGGTTAATAGACAAACAGGGGTTATT
ACTTGCGACTGACCAAGAGCTTACTGATGCTCAAAAACCCTATGCACGGAATCCTATAGATATACAATCCTGGGAAATTA
ATAATAAACAACATCCTTCGTTTACTGACACTATCAGGCATGTCAAACCTACCATTTTAATTGGCTGTTCAGCGCAAACG
GGTGCATTCTCACAAGATATTGTGGAAACTATGTCGACATCCTGCGAGCGACCAATCATTTTCCCTTTATCAAATCCTGA
TGAAAAATGTGAAGCACAGCCCTCAGATATATTGGCATGGAGTAAAGGACGGGCATTAATTGCTACTGGAACTGCTTTTG
CCCCTATTGAATATCAGAACCGAATGGTGCAAATAGCTCAATGCAACAATGCCTTGGTATTCCCTGGAATTGGATTGGGC
GTTTTGGCGGTAAGCGCCTCTCGTTTAACCAAAGATATGATATTGGCTGCCGCCCAGACTTTAAGTAAATTTGCGCCAAG
TAAAAAGGACAGCTTTTTGCCCCTGTTACCCTCATTAGACAATGCGCAAATTGTAGCCAAAGAAATAGCTATTGCAGTAG
CTCAGTGTGCAATAGACTCAGGTTATGCTCAAAAAAATCAAGACAAGGAGCTACCTCGATTAATTGATGAACTCTTTTGG
GAGCCTAGATATCTGCCTTTTAGAAAAAAAGGATGGAGTGAATAG

Upstream 100 bases:

>100_bases
TATCACTAAGTACTTATTCATACCCGCCCTCTTGATGTAAACTACAAAAAGTCGATATTATCACCAGTCAGCAAGTAACG
CTATCTTATGAGAATACCAT

Downstream 100 bases:

>100_bases
AATAAAGCTCTATGACTATATTATTGAAAAATAAATTTTCTTAATTCTTAGTCTGAGGGGTTGGCGAAATTAATCGTTAC
ATTTTTTATAGTCCCGCTCT

Product: malate dehydrogenase

Products: NA

Alternate protein names: NAD-ME 3 [H]

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MLDFSLNRDPQTGELYIETSLCGKPLLTTPQLNKGTAFTQEERKDFGLLGKLPHRVETLDEQVKRAYLQYSSYTTRLQQH
IYLNNLHDKNQIVFYKLLSRHLGEMLPIIYTPIVGAAAKRFSHEYRQPRGLYIAHSDKNQLEEIINNRSNPDIDLVVVTD
GEGVLGIGDQGIGGMDIPVAKLMVYSLCGGIDPTRTLPIFLDVGTNNQELLNDPMYLGCRHPRIKSSEYDDFIKTFVNEI
HKQFPNAFLHWEDFGRGNARRILDQFQDELCTFNDDIQGTGAVTLAAILAACDVTGLPLHEHRIVVFGAGSAGTGISDQI
VDAMVKSGLSLTDAYDRFWLIDKQGLLLATDQELTDAQKPYARNPIDIQSWEINNKQHPSFTDTIRHVKPTILIGCSAQT
GAFSQDIVETMSTSCERPIIFPLSNPDEKCEAQPSDILAWSKGRALIATGTAFAPIEYQNRMVQIAQCNNALVFPGIGLG
VLAVSASRLTKDMILAAAQTLSKFAPSKKDSFLPLLPSLDNAQIVAKEIAIAVAQCAIDSGYAQKNQDKELPRLIDELFW
EPRYLPFRKKGWSE

Sequences:

>Translated_574_residues
MLDFSLNRDPQTGELYIETSLCGKPLLTTPQLNKGTAFTQEERKDFGLLGKLPHRVETLDEQVKRAYLQYSSYTTRLQQH
IYLNNLHDKNQIVFYKLLSRHLGEMLPIIYTPIVGAAAKRFSHEYRQPRGLYIAHSDKNQLEEIINNRSNPDIDLVVVTD
GEGVLGIGDQGIGGMDIPVAKLMVYSLCGGIDPTRTLPIFLDVGTNNQELLNDPMYLGCRHPRIKSSEYDDFIKTFVNEI
HKQFPNAFLHWEDFGRGNARRILDQFQDELCTFNDDIQGTGAVTLAAILAACDVTGLPLHEHRIVVFGAGSAGTGISDQI
VDAMVKSGLSLTDAYDRFWLIDKQGLLLATDQELTDAQKPYARNPIDIQSWEINNKQHPSFTDTIRHVKPTILIGCSAQT
GAFSQDIVETMSTSCERPIIFPLSNPDEKCEAQPSDILAWSKGRALIATGTAFAPIEYQNRMVQIAQCNNALVFPGIGLG
VLAVSASRLTKDMILAAAQTLSKFAPSKKDSFLPLLPSLDNAQIVAKEIAIAVAQCAIDSGYAQKNQDKELPRLIDELFW
EPRYLPFRKKGWSE
>Mature_574_residues
MLDFSLNRDPQTGELYIETSLCGKPLLTTPQLNKGTAFTQEERKDFGLLGKLPHRVETLDEQVKRAYLQYSSYTTRLQQH
IYLNNLHDKNQIVFYKLLSRHLGEMLPIIYTPIVGAAAKRFSHEYRQPRGLYIAHSDKNQLEEIINNRSNPDIDLVVVTD
GEGVLGIGDQGIGGMDIPVAKLMVYSLCGGIDPTRTLPIFLDVGTNNQELLNDPMYLGCRHPRIKSSEYDDFIKTFVNEI
HKQFPNAFLHWEDFGRGNARRILDQFQDELCTFNDDIQGTGAVTLAAILAACDVTGLPLHEHRIVVFGAGSAGTGISDQI
VDAMVKSGLSLTDAYDRFWLIDKQGLLLATDQELTDAQKPYARNPIDIQSWEINNKQHPSFTDTIRHVKPTILIGCSAQT
GAFSQDIVETMSTSCERPIIFPLSNPDEKCEAQPSDILAWSKGRALIATGTAFAPIEYQNRMVQIAQCNNALVFPGIGLG
VLAVSASRLTKDMILAAAQTLSKFAPSKKDSFLPLLPSLDNAQIVAKEIAIAVAQCAIDSGYAQKNQDKELPRLIDELFW
EPRYLPFRKKGWSE

Specific function: Unknown

COG id: COG0281

COG function: function code C; Malic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the malic enzymes family [H]

Homologues:

Organism=Homo sapiens, GI4505143, Length=525, Percent_Identity=36.7619047619048, Blast_Score=375, Evalue=1e-104,
Organism=Homo sapiens, GI4505145, Length=547, Percent_Identity=37.2943327239488, Blast_Score=374, Evalue=1e-104,
Organism=Homo sapiens, GI62420882, Length=550, Percent_Identity=36.9090909090909, Blast_Score=374, Evalue=1e-103,
Organism=Homo sapiens, GI62420880, Length=550, Percent_Identity=36.9090909090909, Blast_Score=374, Evalue=1e-103,
Organism=Homo sapiens, GI239049447, Length=550, Percent_Identity=36.9090909090909, Blast_Score=374, Evalue=1e-103,
Organism=Homo sapiens, GI270265879, Length=458, Percent_Identity=39.9563318777293, Blast_Score=352, Evalue=7e-97,
Organism=Escherichia coli, GI87081919, Length=564, Percent_Identity=45.2127659574468, Blast_Score=523, Evalue=1e-149,
Organism=Caenorhabditis elegans, GI17537199, Length=518, Percent_Identity=36.1003861003861, Blast_Score=338, Evalue=4e-93,
Organism=Saccharomyces cerevisiae, GI6322823, Length=578, Percent_Identity=42.3875432525952, Blast_Score=466, Evalue=1e-132,
Organism=Drosophila melanogaster, GI21356279, Length=547, Percent_Identity=37.1115173674589, Blast_Score=402, Evalue=1e-112,
Organism=Drosophila melanogaster, GI281362674, Length=547, Percent_Identity=37.1115173674589, Blast_Score=402, Evalue=1e-112,
Organism=Drosophila melanogaster, GI281362672, Length=547, Percent_Identity=37.1115173674589, Blast_Score=401, Evalue=1e-112,
Organism=Drosophila melanogaster, GI24646388, Length=537, Percent_Identity=36.1266294227188, Blast_Score=369, Evalue=1e-102,
Organism=Drosophila melanogaster, GI24646386, Length=537, Percent_Identity=36.1266294227188, Blast_Score=369, Evalue=1e-102,
Organism=Drosophila melanogaster, GI78707242, Length=522, Percent_Identity=34.6743295019157, Blast_Score=335, Evalue=4e-92,
Organism=Drosophila melanogaster, GI78707238, Length=522, Percent_Identity=34.6743295019157, Blast_Score=335, Evalue=4e-92,
Organism=Drosophila melanogaster, GI78707232, Length=512, Percent_Identity=32.8125, Blast_Score=330, Evalue=1e-90,
Organism=Drosophila melanogaster, GI281363505, Length=511, Percent_Identity=32.6810176125245, Blast_Score=327, Evalue=1e-89,
Organism=Drosophila melanogaster, GI78707236, Length=511, Percent_Identity=32.6810176125245, Blast_Score=327, Evalue=1e-89,
Organism=Drosophila melanogaster, GI78707240, Length=513, Percent_Identity=34.5029239766082, Blast_Score=325, Evalue=4e-89,
Organism=Drosophila melanogaster, GI281363503, Length=507, Percent_Identity=32.5443786982249, Blast_Score=323, Evalue=2e-88,
Organism=Drosophila melanogaster, GI19922384, Length=548, Percent_Identity=28.2846715328467, Blast_Score=246, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015884
- InterPro:   IPR012301
- InterPro:   IPR012302
- InterPro:   IPR001891
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]

EC number: =1.1.1.38 [H]

Molecular weight: Translated: 63972; Mature: 63972

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00331 MALIC_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFSLNRDPQTGELYIETSLCGKPLLTTPQLNKGTAFTQEERKDFGLLGKLPHRVETLD
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH
EQVKRAYLQYSSYTTRLQQHIYLNNLHDKNQIVFYKLLSRHLGEMLPIIYTPIVGAAAKR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSHEYRQPRGLYIAHSDKNQLEEIINNRSNPDIDLVVVTDGEGVLGIGDQGIGGMDIPVA
HHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHH
KLMVYSLCGGIDPTRTLPIFLDVGTNNQELLNDPMYLGCRHPRIKSSEYDDFIKTFVNEI
HHHHHHHHCCCCCCCEEEEEEEECCCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHH
HKQFPNAFLHWEDFGRGNARRILDQFQDELCTFNDDIQGTGAVTLAAILAACDVTGLPLH
HHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
EHRIVVFGAGSAGTGISDQIVDAMVKSGLSLTDAYDRFWLIDKQGLLLATDQELTDAQKP
CCEEEEEECCCCCCCCHHHHHHHHHHCCCCEECCCCEEEEEECCCEEEECCCHHHHCCCC
YARNPIDIQSWEINNKQHPSFTDTIRHVKPTILIGCSAQTGAFSQDIVETMSTSCERPII
CCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
FPLSNPDEKCEAQPSDILAWSKGRALIATGTAFAPIEYQNRMVQIAQCNNALVFPGIGLG
EECCCCCHHHCCCCCCEEEECCCCEEEEECCEECCCHHHCCEEEEEECCCEEEECCCCHH
VLAVSASRLTKDMILAAAQTLSKFAPSKKDSFLPLLPSLDNAQIVAKEIAIAVAQCAIDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GYAQKNQDKELPRLIDELFWEPRYLPFRKKGWSE
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDFSLNRDPQTGELYIETSLCGKPLLTTPQLNKGTAFTQEERKDFGLLGKLPHRVETLD
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH
EQVKRAYLQYSSYTTRLQQHIYLNNLHDKNQIVFYKLLSRHLGEMLPIIYTPIVGAAAKR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSHEYRQPRGLYIAHSDKNQLEEIINNRSNPDIDLVVVTDGEGVLGIGDQGIGGMDIPVA
HHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHH
KLMVYSLCGGIDPTRTLPIFLDVGTNNQELLNDPMYLGCRHPRIKSSEYDDFIKTFVNEI
HHHHHHHHCCCCCCCEEEEEEEECCCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHH
HKQFPNAFLHWEDFGRGNARRILDQFQDELCTFNDDIQGTGAVTLAAILAACDVTGLPLH
HHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
EHRIVVFGAGSAGTGISDQIVDAMVKSGLSLTDAYDRFWLIDKQGLLLATDQELTDAQKP
CCEEEEEECCCCCCCCHHHHHHHHHHCCCCEECCCCEEEEEECCCEEEECCCHHHHCCCC
YARNPIDIQSWEINNKQHPSFTDTIRHVKPTILIGCSAQTGAFSQDIVETMSTSCERPII
CCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
FPLSNPDEKCEAQPSDILAWSKGRALIATGTAFAPIEYQNRMVQIAQCNNALVFPGIGLG
EECCCCCHHHCCCCCCEEEECCCCEEEEECCEECCCHHHCCEEEEEECCCEEEECCCCHH
VLAVSASRLTKDMILAAAQTLSKFAPSKKDSFLPLLPSLDNAQIVAKEIAIAVAQCAIDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GYAQKNQDKELPRLIDELFWEPRYLPFRKKGWSE
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]