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The map label for this gene is yfbS [C]

Identifier: 52841506

GI number: 52841506

Start: 1403064

End: 1403348

Strand: Reverse

Name: yfbS [C]

Synonym: lpg1275

Alternate gene names: 52841506

Gene position: 1403348-1403064 (Counterclockwise)

Preceding gene: 52841507

Following gene: 52841503

Centisome position: 41.3

GC content: 38.95

Gene sequence:

>285_bases
ATGACTTTGTCCGATTTATTAAACAATGCAGCAACGGCATTAATTATGGCTCCCATTGCAATCAAAATTGCTCAGTCAGC
CCATCTGAATGTGGATTCTTTCTTAATGGCAGTTGCTATTGGTGCTTCGTGTTCATTCCTAACTCCAATTGCCCATCAGA
ACAATACCATGGTTATGGGGCCAGGAAGATACCGATTTTCTGATTATTTTCGTTTGGGATTACCATTGGAACTTATTGTT
ATAATGGCTTCTATTCGAACGATTTTATGGGTGTGGCCATTATAA

Upstream 100 bases:

>100_bases
AAACGACTGCTGCTGCAGATTTGATTGCAAATGGATTTATGAAAATTGCTGGCCAATATTCCCCCCTATCTTTGCCTTGC
TTGCGATTCTGGTTATCACT

Downstream 100 bases:

>100_bases
AAATAAAATAATTTGCATTAAACCTGTATAATAATCGATAAAACAGAATGGTACAGGTTAGGGATATTGCAATTGCATTA
AATTTTTTGAGGGTCAATAT

Product: TrkA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTLSDLLNNAATALIMAPIAIKIAQSAHLNVDSFLMAVAIGASCSFLTPIAHQNNTMVMGPGRYRFSDYFRLGLPLELIV
IMASIRTILWVWPL

Sequences:

>Translated_94_residues
MTLSDLLNNAATALIMAPIAIKIAQSAHLNVDSFLMAVAIGASCSFLTPIAHQNNTMVMGPGRYRFSDYFRLGLPLELIV
IMASIRTILWVWPL
>Mature_93_residues
TLSDLLNNAATALIMAPIAIKIAQSAHLNVDSFLMAVAIGASCSFLTPIAHQNNTMVMGPGRYRFSDYFRLGLPLELIVI
MASIRTILWVWPL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=89, Percent_Identity=40.4494382022472, Blast_Score=65, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 10304; Mature: 10173

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSDLLNNAATALIMAPIAIKIAQSAHLNVDSFLMAVAIGASCSFLTPIAHQNNTMVMG
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCEEEEC
PGRYRFSDYFRLGLPLELIVIMASIRTILWVWPL
CCCCCCCCCEECCCCHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure 
TLSDLLNNAATALIMAPIAIKIAQSAHLNVDSFLMAVAIGASCSFLTPIAHQNNTMVMG
CHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCEEEEC
PGRYRFSDYFRLGLPLELIVIMASIRTILWVWPL
CCCCCCCCCEECCCCHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]