Click here to switch to the map view.

The map label for this gene is ywfO [H]

Identifier: 52841499

GI number: 52841499

Start: 1394907

End: 1395554

Strand: Direct

Name: ywfO [H]

Synonym: lpg1267

Alternate gene names: 52841499

Gene position: 1394907-1395554 (Clockwise)

Preceding gene: 52841497

Following gene: 52841504

Centisome position: 41.05

GC content: 32.1

Gene sequence:

>648_bases
ATGTGGCTTCAAAGGAAGAGTCTGAAGCATAAAAGTATGTGTGATCCAGTACATGGAATTATGTGCGTTGAAAATGAGCT
ATATATTACGATTAAGCGAGTTATCGATTCCCATTACTTTCAAAGACTTCGTCAAATTAAGCAATTATCATTTGCAGAGT
TCGCCTATCCCGGCGCAGTTCATAATAGATTTAGTCATTCAATAGGGGCTTGCTATCTTTCGACAGTAGTTTTTTCGACG
ATTTACAACGATTCTACAAATAATGAGGATCAAAAAATATGTCTAGCGCTTACAGCTTTAATACATGATATAGGGCATGG
CCCATTCTTTCATTCCTTTGAAAAGATATTCAATTATGCTTTAAACTTTGTTGATAACAAAATAGGCAAAATTAGTCATG
AGGATTGGACTCAAGTTTTTTTAAAAAAATTAATAGAGGAAAATTATATTGAAAGAAATTATGGAAGAGTAGTAGAAGAT
ATATATACAAAAGAAACTAATAAATTACATGGAATTATCTCATCACAACTCGATGTAGATCGGTTTGATTATTTACTAAG
GGACAGTCACTTTTATGGTGTTAGTTATGGAAATTTTGATTTACTCTGGTTAATTAATCGATTATGTGAACAAGATGGAG
TGACGTAA

Upstream 100 bases:

>100_bases
CTTCATAGAAAACCGTAAATGCGGTTTTCTATTCTATGAACAATAATAATTTTTATTTGATGTAATCTACTTATATTTAC
TTTGTCTATAATTTAATCAC

Downstream 100 bases:

>100_bases
TAGTATGGATCCCTCATCTTGATTGCATGAATGTTGACACCTTCATTCTGGCTCAAATAGAAGCCTTTCGATAGGTGGCG
GGGTCCATACTATTACGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MWLQRKSLKHKSMCDPVHGIMCVENELYITIKRVIDSHYFQRLRQIKQLSFAEFAYPGAVHNRFSHSIGACYLSTVVFST
IYNDSTNNEDQKICLALTALIHDIGHGPFFHSFEKIFNYALNFVDNKIGKISHEDWTQVFLKKLIEENYIERNYGRVVED
IYTKETNKLHGIISSQLDVDRFDYLLRDSHFYGVSYGNFDLLWLINRLCEQDGVT

Sequences:

>Translated_215_residues
MWLQRKSLKHKSMCDPVHGIMCVENELYITIKRVIDSHYFQRLRQIKQLSFAEFAYPGAVHNRFSHSIGACYLSTVVFST
IYNDSTNNEDQKICLALTALIHDIGHGPFFHSFEKIFNYALNFVDNKIGKISHEDWTQVFLKKLIEENYIERNYGRVVED
IYTKETNKLHGIISSQLDVDRFDYLLRDSHFYGVSYGNFDLLWLINRLCEQDGVT
>Mature_215_residues
MWLQRKSLKHKSMCDPVHGIMCVENELYITIKRVIDSHYFQRLRQIKQLSFAEFAYPGAVHNRFSHSIGACYLSTVVFST
IYNDSTNNEDQKICLALTALIHDIGHGPFFHSFEKIFNYALNFVDNKIGKISHEDWTQVFLKKLIEENYIERNYGRVVED
IYTKETNKLHGIISSQLDVDRFDYLLRDSHFYGVSYGNFDLLWLINRLCEQDGVT

Specific function: Unknown

COG id: COG1078

COG function: function code R; HD superfamily phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Homo sapiens, GI38016914, Length=238, Percent_Identity=32.7731092436975, Blast_Score=103, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17537829, Length=184, Percent_Identity=28.804347826087, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17537827, Length=184, Percent_Identity=28.804347826087, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25245; Mature: 25245

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLQRKSLKHKSMCDPVHGIMCVENELYITIKRVIDSHYFQRLRQIKQLSFAEFAYPGAV
CCCCCHHCCHHHHCCHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HNRFSHSIGACYLSTVVFSTIYNDSTNNEDQKICLALTALIHDIGHGPFFHSFEKIFNYA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LNFVDNKIGKISHEDWTQVFLKKLIEENYIERNYGRVVEDIYTKETNKLHGIISSQLDVD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RFDYLLRDSHFYGVSYGNFDLLWLINRLCEQDGVT
HHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWLQRKSLKHKSMCDPVHGIMCVENELYITIKRVIDSHYFQRLRQIKQLSFAEFAYPGAV
CCCCCHHCCHHHHCCHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HNRFSHSIGACYLSTVVFSTIYNDSTNNEDQKICLALTALIHDIGHGPFFHSFEKIFNYA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LNFVDNKIGKISHEDWTQVFLKKLIEENYIERNYGRVVEDIYTKETNKLHGIISSQLDVD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RFDYLLRDSHFYGVSYGNFDLLWLINRLCEQDGVT
HHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7934828 [H]