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The map label for this gene is virB5

Identifier: 52841485

GI number: 52841485

Start: 1381429

End: 1382139

Strand: Reverse

Name: virB5

Synonym: lpg1253

Alternate gene names: NA

Gene position: 1382139-1381429 (Counterclockwise)

Preceding gene: 52841486

Following gene: 52841484

Centisome position: 40.68

GC content: 43.18

Gene sequence:

>711_bases
ATGAAAAGAGCAGCCTGTTTCTTAATTGCAGCAATGGGTATCAGCAGCGCCAGTCATGCGGATATTTTAGGGGTCGAAGA
TGCGCAGTTGATTGTATTAGCGATGAAACAATTAGGTGAGCTCAAAGAGCAATACCGCGTTTTATCCGATACCTACCAAA
CAGCGAAAAACCAACTTGATAACCTGAATCAACTTAAATCCATGAACTCTGGACATTATGGATTTGGAGATTTTAATAAT
AGTCTCGATTCATTACAAAGCTGGCAATCCCCTGTAAGCACTTGGCAGGATGCATTGCAAAACCTCTCTGGTGGCAATCA
ACAACGATATCAAGCACTCATGGATGCCTATGAAAAGAACCATCCCGCACTGGATGAAAACAGTTATGCGCGTTTCACTA
CTCCTGCCAATGCCGCTCGCTTTAAAGAAGATAAGGCCGTCAATCGTGCGGTGATGGTGCAAACCACCGAAAGCTATAAC
GAAATCAACAAGCATATGGAAGCCCTCCATAAGCTCTCGCAACAAATTGAAAAAACACCCAACACCAAGGGAGCTATTGA
TTTAAATTCCCGCCTCATTACCGAAATCGGGTTTATTCAATTAATGAGCTTAAGACTTCAGGCGTTAATCAGCCAGCAAG
CAGCACAGGAAAATTTATCTGCGCTCCAAGACAGGGCTGAAATGGCAAAGTTTAATCGATTACCCAAGTGA

Upstream 100 bases:

>100_bases
CTGCCAATACTCAATCGGTTAAATTGCTGGATGACATCATGCAAGAGGTCGGTCATGACCCAGAACTTTGGCTTCCTGTC
TTTTATGAAAGGAGCAAAAA

Downstream 100 bases:

>100_bases
CAAGGAGTAACCACATGAAATGGCTTTTGAGTGTATTGATGATCTCATTACTGAGCGGCTGTTCAAAGCCCCCCGATTTG
GATTCTCCCTGCCATCACTT

Product: LvhB5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKRAACFLIAAMGISSASHADILGVEDAQLIVLAMKQLGELKEQYRVLSDTYQTAKNQLDNLNQLKSMNSGHYGFGDFNN
SLDSLQSWQSPVSTWQDALQNLSGGNQQRYQALMDAYEKNHPALDENSYARFTTPANAARFKEDKAVNRAVMVQTTESYN
EINKHMEALHKLSQQIEKTPNTKGAIDLNSRLITEIGFIQLMSLRLQALISQQAAQENLSALQDRAEMAKFNRLPK

Sequences:

>Translated_236_residues
MKRAACFLIAAMGISSASHADILGVEDAQLIVLAMKQLGELKEQYRVLSDTYQTAKNQLDNLNQLKSMNSGHYGFGDFNN
SLDSLQSWQSPVSTWQDALQNLSGGNQQRYQALMDAYEKNHPALDENSYARFTTPANAARFKEDKAVNRAVMVQTTESYN
EINKHMEALHKLSQQIEKTPNTKGAIDLNSRLITEIGFIQLMSLRLQALISQQAAQENLSALQDRAEMAKFNRLPK
>Mature_236_residues
MKRAACFLIAAMGISSASHADILGVEDAQLIVLAMKQLGELKEQYRVLSDTYQTAKNQLDNLNQLKSMNSGHYGFGDFNN
SLDSLQSWQSPVSTWQDALQNLSGGNQQRYQALMDAYEKNHPALDENSYARFTTPANAARFKEDKAVNRAVMVQTTESYN
EINKHMEALHKLSQQIEKTPNTKGAIDLNSRLITEIGFIQLMSLRLQALISQQAAQENLSALQDRAEMAKFNRLPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26456; Mature: 26456

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAACFLIAAMGISSASHADILGVEDAQLIVLAMKQLGELKEQYRVLSDTYQTAKNQLD
CCHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLNQLKSMNSGHYGFGDFNNSLDSLQSWQSPVSTWQDALQNLSGGNQQRYQALMDAYEKN
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
HPALDENSYARFTTPANAARFKEDKAVNRAVMVQTTESYNEINKHMEALHKLSQQIEKTP
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
NTKGAIDLNSRLITEIGFIQLMSLRLQALISQQAAQENLSALQDRAEMAKFNRLPK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRAACFLIAAMGISSASHADILGVEDAQLIVLAMKQLGELKEQYRVLSDTYQTAKNQLD
CCHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLNQLKSMNSGHYGFGDFNNSLDSLQSWQSPVSTWQDALQNLSGGNQQRYQALMDAYEKN
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
HPALDENSYARFTTPANAARFKEDKAVNRAVMVQTTESYNEINKHMEALHKLSQQIEKTP
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
NTKGAIDLNSRLITEIGFIQLMSLRLQALISQQAAQENLSALQDRAEMAKFNRLPK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA