Click here to switch to the map view.

The map label for this gene is 52841472

Identifier: 52841472

GI number: 52841472

Start: 1368280

End: 1368645

Strand: Reverse

Name: 52841472

Synonym: lpg1240

Alternate gene names: NA

Gene position: 1368645-1368280 (Counterclockwise)

Preceding gene: 52841475

Following gene: 52841471

Centisome position: 40.28

GC content: 40.44

Gene sequence:

>366_bases
ATGATACTAGCAAACAAACGAAAGTTTGTATATTGCGCCCTTTGCTTTTCGCTTCGGGATTTTGAAGTTAGCTACGCTCA
CAGATTGGCACAGCCTATTGATTTTCGAGATCCCGCTAGTTATGCTGAACAAGTTAGTCCATTATTGCGGAGAAATAAAA
TGTCAAAGAAGACAGTATCCCAAATGGAAGCACTACTTATGGATAAAATCGAACAAGCCAAAGTAAGGCTTGATAAACTT
CAACAAAAGCACAAGATCGAAATAGGCATGCTCGCCTATAAACACGGCTTGCAAAATATCGACACCAAGCAACTGGATAA
TGCCTTTGCCCAAATGGCTAAGGAGTTAATCCATGAACACGCTTGA

Upstream 100 bases:

>100_bases
AAAAGCAATCGCCACGGAATCCCCAAAGAGAATGAATCCATCGGTTGCTTTTTATAATGAAAAAACCTTTGTCCATTAAA
GATTTTTAAGTGTTTGAATC

Downstream 100 bases:

>100_bases
ACAAATCAAAAAAGAAAAACAGGCCATTTCAAAAAGTAAACAGTCACTGGCTTTAGCAAAACTCAAAAAACGCCGGGCGG
ATACTCGGTGTAAGATTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MILANKRKFVYCALCFSLRDFEVSYAHRLAQPIDFRDPASYAEQVSPLLRRNKMSKKTVSQMEALLMDKIEQAKVRLDKL
QQKHKIEIGMLAYKHGLQNIDTKQLDNAFAQMAKELIHEHA

Sequences:

>Translated_121_residues
MILANKRKFVYCALCFSLRDFEVSYAHRLAQPIDFRDPASYAEQVSPLLRRNKMSKKTVSQMEALLMDKIEQAKVRLDKL
QQKHKIEIGMLAYKHGLQNIDTKQLDNAFAQMAKELIHEHA
>Mature_121_residues
MILANKRKFVYCALCFSLRDFEVSYAHRLAQPIDFRDPASYAEQVSPLLRRNKMSKKTVSQMEALLMDKIEQAKVRLDKL
QQKHKIEIGMLAYKHGLQNIDTKQLDNAFAQMAKELIHEHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14091; Mature: 14091

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILANKRKFVYCALCFSLRDFEVSYAHRLAQPIDFRDPASYAEQVSPLLRRNKMSKKTVS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QMEALLMDKIEQAKVRLDKLQQKHKIEIGMLAYKHGLQNIDTKQLDNAFAQMAKELIHEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure
MILANKRKFVYCALCFSLRDFEVSYAHRLAQPIDFRDPASYAEQVSPLLRRNKMSKKTVS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QMEALLMDKIEQAKVRLDKLQQKHKIEIGMLAYKHGLQNIDTKQLDNAFAQMAKELIHEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA