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The map label for this gene is flgH

Identifier: 52841454

GI number: 52841454

Start: 1347459

End: 1348151

Strand: Direct

Name: flgH

Synonym: lpg1222

Alternate gene names: 52841454

Gene position: 1347459-1348151 (Clockwise)

Preceding gene: 52841453

Following gene: 52841455

Centisome position: 39.66

GC content: 41.7

Gene sequence:

>693_bases
ATGAACCGATTAAATATAGCTGTCTCTTGCTTAGCTACAGCCTTGTTGTTTGGGTGTGAAGCCTTACACCCACCGGCACC
AGGCGACAATCCTGATTATGCTCCAACTTATCCTGTAACTCCGGATCCCAAGGAATTAAGAAAGGTAAGTGGTGCTATTT
ATAGTAGTGAAACGGCTCTCCCTTTGTTTGAAACACCGAGGGCAAGGCATCCGGGTGATATATTAACGGTGTATTTAATC
GAAAAAACTGATGCTCAGAAAAATGCGACTACCACTCAGAGAAAAAATGATACGACAAAAATCACAAATAAACTCTTTTT
GGGTAGACCCATCTCTTTGGGAAGTGGTTACAGCATGGATTTTGACTTGGATAACCAAAGGCAGTTTAACGGAGAAGGCA
GATCAATACAAAACAATAAGTTAGCGGGCAGTATATCAGTGACGGTAGCCAAAGTGTTGGCGAATGGCAATATGGTTGTT
CAAGGTGAGAAATGGGTCAGAATTAACCAGGGCAATGAATTCGTTCGTCTTTCAGGGATAGTTCGTCCCCAGGATATAAA
AGCAGATAACACTATTACCTCTGACAGAATTGCCAATGCGAGAATTTCTTATGGTGGAACTGGCCAAATTAATAATACGA
ATGCTCAAGGATGGTTATCAAGGATTTTATGGGGGCCTTTATTCCCGACTTAA

Upstream 100 bases:

>100_bases
GATTCAGGCTCAAAGAAGCTATGAAATAACAGCAAAAAGCATTCAGACCGTTGACAGTATGTTGCAATATTTAACCCAAA
CTCTGTAAGTGAGATAGGTT

Downstream 100 bases:

>100_bases
TTGGTAATTATCGAGATTACAAACGACAAGGAATTAAGATGCGGCGAATGCTGGTTATTCGATGGATATTGGCAATTCAT
TTGATTGCAACTCAAGTTTT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETALPLFETPRARHPGDILTVYLI
EKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVV
QGEKWVRINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT

Sequences:

>Translated_230_residues
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETALPLFETPRARHPGDILTVYLI
EKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVV
QGEKWVRINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT
>Mature_230_residues
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETALPLFETPRARHPGDILTVYLI
EKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVV
QGEKWVRINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=222, Percent_Identity=33.7837837837838, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 25144; Mature: 25144

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETAL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCC
PLFETPRARHPGDILTVYLIEKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMD
CEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEECCCEECCCCCEEE
FDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRINQGNEFVRLSGI
CCCCCCEEECCCCCCCCCCCCCCCHHHEEEHHHHCCCEEEECCEEEEECCCCCEEEEECC
VRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT
CCCCCCCCCCCCCCCHHCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETAL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCC
PLFETPRARHPGDILTVYLIEKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMD
CEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEECCCEECCCCCEEE
FDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRINQGNEFVRLSGI
CCCCCCEEECCCCCCCCCCCCCCCHHHEEEHHHHCCCEEEECCEEEEECCCCCEEEEECC
VRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT
CCCCCCCCCCCCCCCHHCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA