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The map label for this gene is glf [C]

Identifier: 52841387

GI number: 52841387

Start: 1270620

End: 1272107

Strand: Reverse

Name: glf [C]

Synonym: lpg1153

Alternate gene names: 52841387

Gene position: 1272107-1270620 (Counterclockwise)

Preceding gene: 52841390

Following gene: 52841386

Centisome position: 37.44

GC content: 38.31

Gene sequence:

>1488_bases
ATGCAAAACAAATTATTACAGTTTATTTGCATCAAAAAATTGTACAAACAGAAACAGTCTTATAAATCAATAATAAAATT
TGCCAGTTTGCCTTTAGCAAAGAAACAAATTATGTGCTCCATTGCATTACTCTTCGTTATAAAATTGTCTTGGGCAACTC
ATCATTATGACACAATAATTATCGGTGCCGGGGTATCCGGATTAACCGCAGCGCATCATTTACATAAGGCACAGCAAAAA
GTACTGATTATTGAGGCAAAAAACCGCCTTGGAGGCAGGGTATATACCAGCTATGATTGGGGTTTCGCCACTGATTTGGG
GGCATCCTGGATTCATGCCATTGAAAACAACCCATTAATGCCGCTGATTGGTAAACAGTCAATTATTATCAATACTTACA
GTAACTCTGATCCAGTAGCCATGCTGAATAATTATGCTTTATATGACAGCGAAGGAAAGCCAGTATCAAAACAAACGCAG
ACTTTATTTTCAAGTTTAACCAAGGAATTCTTAAGATATTGCCAAACTCGCAATCAAATGATCTCTTTCGCGCAAAATCT
CACTACCTTTGCAAAACAAAAAAAACTTACTTCTGAACAACTTGCCTTACTGAGTTATGCCTTGGAAAATATCTATACTT
ACGAATTTGCTGATAATTTGACTAAATTATCACGCAATGTCCATTCCGCATCCGAGGCATCCATAGCTTCTGGAAAAAAT
GCCCTTGTACCTGAAGGCTATTTCCAACTTTTCCGCCCACTTACTCAGCATGTTCCTATTCATTTAAACCAAATAGTTAG
CCAAATTAATTACGGAGCTGATGGTGTCAACATCATAACTCAACATGAAAAATATCATGCCAACCAAGTCATTATTACCG
TCCCATTAGGCGTGCTCAAAGCCAATGCAATCAAATTTCATCCTGCTTTACCCAAAGATAAGCGCACAGCAATCTCTCAG
TTAGGAATGGGAAGTTATGAAAAATTGTACTTATTATTTGACAAGGTTTTTTGGGATAAAGACAAGGAATGGATTGGCAT
GCTCCCCCAAAATGAGCAAGAAGCATTCAATATCTTTAATTATTACAAGTACACAAAAAAGCCTGTACTCATCGTATTTA
CCAGTGGCAAACTTGCGCACGATATGGAAAAAGAACATTTAACCGAATGGGTGATGCAACATTTAAGACGAATTTATGGA
AGCAACATCCCGAAACCAATTAAAAATAAAAAAACTCATTGGGGCAGTGATCCATTCACACGTGGCAGTTATTCCTACTT
GCCGGTAAACGTTGATAAGAGTGTTATTGGCATTCTCGCCCAACCTGTAGCTAACCGTCTCTATTTTGCTGGAGAAGCTA
CCTCAACCACAGATCCCAGTACTGTGCATGGCGCTTATCTATCAGGGATACGCGCAGCAGAAGAAGTACTGGCCAGCATC
AAACACTCTGGAAAAAATAGAGAAAAAGATAAAGCTGTCAACTCATAA

Upstream 100 bases:

>100_bases
CAAAATTCTAGCCAGTCGAGGTTAGATGCGAAGCTTGGTTGGGCAAATCAATTTGTCCGGCTAAACCTATAAATTAAAAT
AGCGATGTAGGAAGAAAAAC

Downstream 100 bases:

>100_bases
ACCCATCTTGATTTTGGAGAAAGTGATGTACACTAAAAGAGATAATCATTTGCTGATTAATAAAGAGGAAGAACAAGAAG
AAAACCAAAAAACGGTATTT

Product: amine oxidase

Products: UDP-D-galacto-1,4-furanose [C]

Alternate protein names: Twin-Arginine Translocation Pathway Signal; FAD Dependent Oxidoreductase; Amine Oxidase Protein; Polyamine Oxidase; Monoamine Oxidase; Amine Oxidase Family Protein; Flavin-Containing Amine Oxidase; Oxidoreductase; Flavin-Containing Monoamine Oxidase; Putrescine Oxidase; Amine Oxidase Flavin-Containing; Amine Oxidoreductase Domain-Containing Protein; Fad-Dependent Amine Oxidoreductase

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MQNKLLQFICIKKLYKQKQSYKSIIKFASLPLAKKQIMCSIALLFVIKLSWATHHYDTIIIGAGVSGLTAAHHLHKAQQK
VLIIEAKNRLGGRVYTSYDWGFATDLGASWIHAIENNPLMPLIGKQSIIINTYSNSDPVAMLNNYALYDSEGKPVSKQTQ
TLFSSLTKEFLRYCQTRNQMISFAQNLTTFAKQKKLTSEQLALLSYALENIYTYEFADNLTKLSRNVHSASEASIASGKN
ALVPEGYFQLFRPLTQHVPIHLNQIVSQINYGADGVNIITQHEKYHANQVIITVPLGVLKANAIKFHPALPKDKRTAISQ
LGMGSYEKLYLLFDKVFWDKDKEWIGMLPQNEQEAFNIFNYYKYTKKPVLIVFTSGKLAHDMEKEHLTEWVMQHLRRIYG
SNIPKPIKNKKTHWGSDPFTRGSYSYLPVNVDKSVIGILAQPVANRLYFAGEATSTTDPSTVHGAYLSGIRAAEEVLASI
KHSGKNREKDKAVNS

Sequences:

>Translated_495_residues
MQNKLLQFICIKKLYKQKQSYKSIIKFASLPLAKKQIMCSIALLFVIKLSWATHHYDTIIIGAGVSGLTAAHHLHKAQQK
VLIIEAKNRLGGRVYTSYDWGFATDLGASWIHAIENNPLMPLIGKQSIIINTYSNSDPVAMLNNYALYDSEGKPVSKQTQ
TLFSSLTKEFLRYCQTRNQMISFAQNLTTFAKQKKLTSEQLALLSYALENIYTYEFADNLTKLSRNVHSASEASIASGKN
ALVPEGYFQLFRPLTQHVPIHLNQIVSQINYGADGVNIITQHEKYHANQVIITVPLGVLKANAIKFHPALPKDKRTAISQ
LGMGSYEKLYLLFDKVFWDKDKEWIGMLPQNEQEAFNIFNYYKYTKKPVLIVFTSGKLAHDMEKEHLTEWVMQHLRRIYG
SNIPKPIKNKKTHWGSDPFTRGSYSYLPVNVDKSVIGILAQPVANRLYFAGEATSTTDPSTVHGAYLSGIRAAEEVLASI
KHSGKNREKDKAVNS
>Mature_495_residues
MQNKLLQFICIKKLYKQKQSYKSIIKFASLPLAKKQIMCSIALLFVIKLSWATHHYDTIIIGAGVSGLTAAHHLHKAQQK
VLIIEAKNRLGGRVYTSYDWGFATDLGASWIHAIENNPLMPLIGKQSIIINTYSNSDPVAMLNNYALYDSEGKPVSKQTQ
TLFSSLTKEFLRYCQTRNQMISFAQNLTTFAKQKKLTSEQLALLSYALENIYTYEFADNLTKLSRNVHSASEASIASGKN
ALVPEGYFQLFRPLTQHVPIHLNQIVSQINYGADGVNIITQHEKYHANQVIITVPLGVLKANAIKFHPALPKDKRTAISQ
LGMGSYEKLYLLFDKVFWDKDKEWIGMLPQNEQEAFNIFNYYKYTKKPVLIVFTSGKLAHDMEKEHLTEWVMQHLRRIYG
SNIPKPIKNKKTHWGSDPFTRGSYSYLPVNVDKSVIGILAQPVANRLYFAGEATSTTDPSTVHGAYLSGIRAAEEVLASI
KHSGKNREKDKAVNS

Specific function: Involved In The Conversion Of UDP-Galp Into UDP-Galf Through A 2-Keto Intermediate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58761546, Length=342, Percent_Identity=29.5321637426901, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI58761544, Length=342, Percent_Identity=29.5321637426901, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI23097272, Length=468, Percent_Identity=26.7094017094017, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI28559076, Length=455, Percent_Identity=27.032967032967, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI28559074, Length=501, Percent_Identity=26.1477045908184, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI116256451, Length=253, Percent_Identity=31.6205533596838, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI28559080, Length=485, Percent_Identity=25.979381443299, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI4557735, Length=485, Percent_Identity=25.5670103092783, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI38202207, Length=464, Percent_Identity=22.6293103448276, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI46397310, Length=312, Percent_Identity=24.3589743589744, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193210286, Length=474, Percent_Identity=28.0590717299578, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI193207849, Length=458, Percent_Identity=25.5458515283843, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17509955, Length=265, Percent_Identity=29.4339622641509, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI32566280, Length=271, Percent_Identity=27.6752767527675, Blast_Score=96, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6323662, Length=503, Percent_Identity=23.0616302186879, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24667273, Length=364, Percent_Identity=31.043956043956, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI21356479, Length=364, Percent_Identity=31.043956043956, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI19922014, Length=488, Percent_Identity=26.4344262295082, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24661247, Length=478, Percent_Identity=27.4058577405858, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24666069, Length=458, Percent_Identity=26.8558951965066, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21355313, Length=250, Percent_Identity=34.8, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17136274, Length=472, Percent_Identity=25.2118644067797, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666065, Length=451, Percent_Identity=26.8292682926829, Blast_Score=106, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.99.9 [C]

Molecular weight: Translated: 55895; Mature: 55895

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKLLQFICIKKLYKQKQSYKSIIKFASLPLAKKQIMCSIALLFVIKLSWATHHYDTII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGAGVSGLTAAHHLHKAQQKVLIIEAKNRLGGRVYTSYDWGFATDLGASWIHAIENNPLM
EECCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCC
PLIGKQSIIINTYSNSDPVAMLNNYALYDSEGKPVSKQTQTLFSSLTKEFLRYCQTRNQM
EEECCCEEEEEECCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ISFAQNLTTFAKQKKLTSEQLALLSYALENIYTYEFADNLTKLSRNVHSASEASIASGKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCHHHHHHHCCCC
ALVPEGYFQLFRPLTQHVPIHLNQIVSQINYGADGVNIITQHEKYHANQVIITVPLGVLK
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHCCCEEEEEECHHHHH
ANAIKFHPALPKDKRTAISQLGMGSYEKLYLLFDKVFWDKDKEWIGMLPQNEQEAFNIFN
CCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHH
YYKYTKKPVLIVFTSGKLAHDMEKEHLTEWVMQHLRRIYGSNIPKPIKNKKTHWGSDPFT
HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RGSYSYLPVNVDKSVIGILAQPVANRLYFAGEATSTTDPSTVHGAYLSGIRAAEEVLASI
CCCCEEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KHSGKNREKDKAVNS
HHCCCCCCHHHCCCC
>Mature Secondary Structure
MQNKLLQFICIKKLYKQKQSYKSIIKFASLPLAKKQIMCSIALLFVIKLSWATHHYDTII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGAGVSGLTAAHHLHKAQQKVLIIEAKNRLGGRVYTSYDWGFATDLGASWIHAIENNPLM
EECCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCC
PLIGKQSIIINTYSNSDPVAMLNNYALYDSEGKPVSKQTQTLFSSLTKEFLRYCQTRNQM
EEECCCEEEEEECCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ISFAQNLTTFAKQKKLTSEQLALLSYALENIYTYEFADNLTKLSRNVHSASEASIASGKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCHHHHHHHCCCC
ALVPEGYFQLFRPLTQHVPIHLNQIVSQINYGADGVNIITQHEKYHANQVIITVPLGVLK
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHCCCEEEEEECHHHHH
ANAIKFHPALPKDKRTAISQLGMGSYEKLYLLFDKVFWDKDKEWIGMLPQNEQEAFNIFN
CCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHH
YYKYTKKPVLIVFTSGKLAHDMEKEHLTEWVMQHLRRIYGSNIPKPIKNKKTHWGSDPFT
HHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RGSYSYLPVNVDKSVIGILAQPVANRLYFAGEATSTTDPSTVHGAYLSGIRAAEEVLASI
CCCCEEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KHSGKNREKDKAVNS
HHCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDPgalactose [C]

Specific reaction: UDPgalactose --> UDP-D-galacto-1,4-furanose [C]

General reaction: Group transfer (intramolecular Isomerization) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA