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The map label for this gene is 52841369

Identifier: 52841369

GI number: 52841369

Start: 1249801

End: 1250412

Strand: Reverse

Name: 52841369

Synonym: lpg1135

Alternate gene names: NA

Gene position: 1250412-1249801 (Counterclockwise)

Preceding gene: 52841371

Following gene: 52841368

Centisome position: 36.8

GC content: 37.09

Gene sequence:

>612_bases
ATGAAAAAAATAGCACCAACACTAAAAAATGAGATCATCAATACAGCAATAGACATTGCCCAGGATACCTCTTGGGAAAA
AGTGAGGCTGATTGATATCGCTAAAGCATTAAATATCGATTTAAATACGATCCGATATTTTTTTGCGGAAAAAGAGCAAA
TCATTGATGGCTGTTTTGATCGTGCTGATGAAGCCATGCTCAATGCGTCCTCCAGACCAAAATTTGATTTACTCACTGCC
AAAGAAAAACTGCATGATTTATTAATGACTTGGTTAAGTACTTTCGAAGGCCAGCAAAAAGTAATCCGGCAAATGATATT
TCATAAATTAGAGCCTGGTCATCTTCATCTTCAATTGCCTGCAATCAAACGCATCAGCCAAACTGTTCAATGGTGGCGTG
AAGCAGCTGGTCTTCGAGAAACCTTTATTCAACGTGCCATCCAGGAAACCGGATTAACCATCATTTATCTGGCCACCTTT
AGTTATTGGTTATTAGATAACTCCACAGAGCATCTTGCAACTCGTCTTTTTTTGGAAAACAAATTAAATATGGCAAAAAA
TTTATCCAATTTTTGGGGTTTTACTTACTATGCACCATCTAAAATTAGCTGA

Upstream 100 bases:

>100_bases
TTTTGATTTAACTTATAGTTAATTTAACTACCAAAACCATCAAAAATTAATCCTGATCATAAAATTAGTAATAAACTAAT
AAGAGACAGGGAGGTATTTC

Downstream 100 bases:

>100_bases
GAGACTTGGTATTCAATTTCCTATCATTCAAGCACCTATGGCCGGAGGAGCTACTACTCCTGAGTTGGTTGCAGCGGTTT
CTAACAGTGGTGGTTTGGGC

Product: TetR family regulatory protein

Products: NA

Alternate protein names: Regulatory Protein TetR; TetR Family Regulatory Protein; Bacterial Regulatory Protein; Transcriptional Regulatory Protein TetR Family

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKKIAPTLKNEIINTAIDIAQDTSWEKVRLIDIAKALNIDLNTIRYFFAEKEQIIDGCFDRADEAMLNASSRPKFDLLTA
KEKLHDLLMTWLSTFEGQQKVIRQMIFHKLEPGHLHLQLPAIKRISQTVQWWREAAGLRETFIQRAIQETGLTIIYLATF
SYWLLDNSTEHLATRLFLENKLNMAKNLSNFWGFTYYAPSKIS

Sequences:

>Translated_203_residues
MKKIAPTLKNEIINTAIDIAQDTSWEKVRLIDIAKALNIDLNTIRYFFAEKEQIIDGCFDRADEAMLNASSRPKFDLLTA
KEKLHDLLMTWLSTFEGQQKVIRQMIFHKLEPGHLHLQLPAIKRISQTVQWWREAAGLRETFIQRAIQETGLTIIYLATF
SYWLLDNSTEHLATRLFLENKLNMAKNLSNFWGFTYYAPSKIS
>Mature_203_residues
MKKIAPTLKNEIINTAIDIAQDTSWEKVRLIDIAKALNIDLNTIRYFFAEKEQIIDGCFDRADEAMLNASSRPKFDLLTA
KEKLHDLLMTWLSTFEGQQKVIRQMIFHKLEPGHLHLQLPAIKRISQTVQWWREAAGLRETFIQRAIQETGLTIIYLATF
SYWLLDNSTEHLATRLFLENKLNMAKNLSNFWGFTYYAPSKIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23636; Mature: 23636

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAPTLKNEIINTAIDIAQDTSWEKVRLIDIAKALNIDLNTIRYFFAEKEQIIDGCFD
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RADEAMLNASSRPKFDLLTAKEKLHDLLMTWLSTFEGQQKVIRQMIFHKLEPGHLHLQLP
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECH
AIKRISQTVQWWREAAGLRETFIQRAIQETGLTIIYLATFSYWLLDNSTEHLATRLFLEN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHH
KLNMAKNLSNFWGFTYYAPSKIS
HHHHHHHHHHHCCEEEECCCCCC
>Mature Secondary Structure
MKKIAPTLKNEIINTAIDIAQDTSWEKVRLIDIAKALNIDLNTIRYFFAEKEQIIDGCFD
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RADEAMLNASSRPKFDLLTAKEKLHDLLMTWLSTFEGQQKVIRQMIFHKLEPGHLHLQLP
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECH
AIKRISQTVQWWREAAGLRETFIQRAIQETGLTIIYLATFSYWLLDNSTEHLATRLFLEN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHH
KLNMAKNLSNFWGFTYYAPSKIS
HHHHHHHHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA