Click here to switch to the map view.

The map label for this gene is 52841367

Identifier: 52841367

GI number: 52841367

Start: 1248525

End: 1248704

Strand: Direct

Name: 52841367

Synonym: lpg1133

Alternate gene names: NA

Gene position: 1248525-1248704 (Clockwise)

Preceding gene: 52841363

Following gene: 52841370

Centisome position: 36.75

GC content: 30.56

Gene sequence:

>180_bases
ATGCCATCCCTGTTTAAAATAACGAAACATACCGATCCTGTTATGTTATTTATAATTTTTATTATAAGCCAAGCTAGGAC
AATGGATGAAAGAATTTTTCAGGACTTACTAAAACCCCCAGTCTCTTTGTTAAAAAAGTTTTTAATTCGGTCATTTAGTT
TATCTAAACTCCCTCATTAA

Upstream 100 bases:

>100_bases
TGGCAAATAAAATATAGAATCCAATATACGCCAGGCCGCCTTCAAGCAAAAAATAATCACCACCTGAACCAAACAGAACT
TCAGAAAATTTCAGATCTCC

Downstream 100 bases:

>100_bases
AAACATTTTTTGCCTCGATCTTAAGGTTTTTTGTAAGTCCTGTTTTTGTAATCATTCACCTCTCTTTTACCTAATTTCTG
CCTCAATAACTAAAGTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 58

Protein sequence:

>59_residues
MPSLFKITKHTDPVMLFIIFIISQARTMDERIFQDLLKPPVSLLKKFLIRSFSLSKLPH

Sequences:

>Translated_59_residues
MPSLFKITKHTDPVMLFIIFIISQARTMDERIFQDLLKPPVSLLKKFLIRSFSLSKLPH
>Mature_58_residues
PSLFKITKHTDPVMLFIIFIISQARTMDERIFQDLLKPPVSLLKKFLIRSFSLSKLPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6929; Mature: 6797

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLFKITKHTDPVMLFIIFIISQARTMDERIFQDLLKPPVSLLKKFLIRSFSLSKLPH
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PSLFKITKHTDPVMLFIIFIISQARTMDERIFQDLLKPPVSLLKKFLIRSFSLSKLPH
CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA