Click here to switch to the map view.

The map label for this gene is 52841316

Identifier: 52841316

GI number: 52841316

Start: 1177925

End: 1178332

Strand: Direct

Name: 52841316

Synonym: lpg1082

Alternate gene names: NA

Gene position: 1177925-1178332 (Clockwise)

Preceding gene: 52841313

Following gene: 52841317

Centisome position: 34.67

GC content: 43.87

Gene sequence:

>408_bases
ATGACAAAATTGGGGTTAGGTTCCGCCTCTTCACCGCGCATGTTGTTTGTCCGTGCAATCCAACCTCAAACCTGGATTGT
CCCATGCATGCCATTTTGGCTTTCGCTTATCAGCTTCTTTAGCTCATCATTGCTTTCGATGTTTATCAGCAGTTCACTTA
CATTAACCATACCCATTAGCCTAGCCTTATTCCGGATGAAGCTTCCAGATTCGTGTTTACCTATCAGCAAATCCACGACG
TTTACATGCGTAAACTTCAGTACATTGTCATTCGAGCTTCGCACGCCATCGTTACCAATGACGCACGTCGAATTAGGCTA
CTATGAACGGAATCATAGGTACTCTAATAGTCCCGTAACGAAACCAATAAATGCATTCCGTAGTTTGACTACCCGTACAA
TCACATAG

Upstream 100 bases:

>100_bases
GTCTATCTTCTGCCCGCTTCAGCATCAGTTTTCCTTGCGGTTAACCTGCCTTACTTAAAATTGCTAAGGCACTGAGTCGG
GTTTACCTCGTTCCGTCTAC

Downstream 100 bases:

>100_bases
ACGACCCATCGAGTCGCACCTAAGGGCGCAATATACATTGCCTTGCAATGTTGAAATTTAAACCAAAAATATATTCTTTA
GTCTAATATTTAATGAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTKLGLGSASSPRMLFVRAIQPQTWIVPCMPFWLSLISFFSSSLLSMFISSSLTLTIPISLALFRMKLPDSCLPISKSTT
FTCVNFSTLSFELRTPSLPMTHVELGYYERNHRYSNSPVTKPINAFRSLTTRTIT

Sequences:

>Translated_135_residues
MTKLGLGSASSPRMLFVRAIQPQTWIVPCMPFWLSLISFFSSSLLSMFISSSLTLTIPISLALFRMKLPDSCLPISKSTT
FTCVNFSTLSFELRTPSLPMTHVELGYYERNHRYSNSPVTKPINAFRSLTTRTIT
>Mature_134_residues
TKLGLGSASSPRMLFVRAIQPQTWIVPCMPFWLSLISFFSSSLLSMFISSSLTLTIPISLALFRMKLPDSCLPISKSTTF
TCVNFSTLSFELRTPSLPMTHVELGYYERNHRYSNSPVTKPINAFRSLTTRTIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15207; Mature: 15076

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLGLGSASSPRMLFVRAIQPQTWIVPCMPFWLSLISFFSSSLLSMFISSSLTLTIPIS
CCCCCCCCCCCCCEEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
LALFRMKLPDSCLPISKSTTFTCVNFSTLSFELRTPSLPMTHVELGYYERNHRYSNSPVT
EEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECEEECCCCCCCCCCC
KPINAFRSLTTRTIT
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKLGLGSASSPRMLFVRAIQPQTWIVPCMPFWLSLISFFSSSLLSMFISSSLTLTIPIS
CCCCCCCCCCCCEEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
LALFRMKLPDSCLPISKSTTFTCVNFSTLSFELRTPSLPMTHVELGYYERNHRYSNSPVT
EEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECEEECCCCCCCCCCC
KPINAFRSLTTRTIT
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA