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The map label for this gene is czcB [H]

Identifier: 52841241

GI number: 52841241

Start: 1096026

End: 1097282

Strand: Direct

Name: czcB [H]

Synonym: lpg1007

Alternate gene names: 52841241

Gene position: 1096026-1097282 (Clockwise)

Preceding gene: 52841240

Following gene: 52841242

Centisome position: 32.26

GC content: 39.86

Gene sequence:

>1257_bases
ATGAATCTATTAAAACCAATCGGTTTATCCCTAAAACTTGCTGTGTTCCTGTTAGGAATGAGCTCTTTTTCGCTTTGGGC
GGAAGAAACAACTCATGCTACAGAAGAAAATAATCATCAAGAGACCATGGAAAAAGGACCTCATGGAGGCCGTTTGTTTA
AAGATGGCGATTTGGCCTTAGAGTTTTTAATTTTTGAGCGTGGTATGCCACCTCACTTTAGAGCTTATCTTTATAAAAAT
GGGGAAATGATTTTGCCCCAAAAGGCAGAATTAATCGTAAATCTCACTCGATTTGGTGGAAAAAAAGAGCAGATTACTTT
TATTCCTGTGGAAAATTTTTTGCAAAGCAACCAGATCATTGAAGAACCTCATTCTTTTGATGTAACAATTCAATTAAATA
GTTTTGGAAAGCCATTGAGTTGGCATTACTCTACGTATGAAGGTCGAGTAAAAATTGCTCCTGCTGTTCTTAAAGCAGCG
GGGATAGAAACAGCAGTTGCCCAAGAACAAACGATAAAAACGCAATTAAATGCTGTAGGCAAAATCGTCACCAATCGTGA
TACTTCAGCACCTATTTATGCACGTTATTCGGGAATTATTAAAGTAATGAATAAAAATTTAGGCGATGAAGTGACAAAAG
GGGATGTGTTGGCAACGATTGAAAGTAATGAGAGTTTGCAAAATTACGAAATAAGATCTCCCATAACGGGAACGATAGTA
CAAAAATATGCCACCAATGGTGAGTTTGCTCAAAACACCAAACCTATTTTTGAGGTAGCCAATTTAGTTACTGTTTGGGC
TGATTTTACCTTATATCGCAAGGATGCACCTTTAGTAAAGCCGGGTATGGAAGTCATTGTGACTGGGGATGAAGGAAAGC
CCAAATCAGTAAGTACCATTAGCTACATTTCACCTTTAGGGGTTGAGGACAGTCAAACCACACTGGCACGTGCTGTTCTT
AATAATGACACTCGCATCTGGCTTCCTGGTATGTATGTGAATGGTGCCATCGTGATTAAAGAGAAAATAGCCCCAGTTGC
AGTACTTCTTTCGGCACTCCAACAAATGGGTGAACAAGACGTGGTTTTTGTTCAGCAAGGCGATTATTTTGAAGCCACTC
CAGTTAATCTGGGTGAAAAAGACGAGCAATGGGCAGAAGTGATTTCGGGATTGGATGCGGGGCAGCGCTATGTGAGCAAA
AACAGTTTTTATATCAAAGCAGAAATAGGCAAAGAAGGCGCAAGCCATGACCACTAA

Upstream 100 bases:

>100_bases
ATGAAGAGGAACGACACTATCAACAGGCACATGCAGATTATCATAAAACATTAATTCAACTTACAGGGCTTTTAGGTCTT
CATCCTACCAAGGAGAGTAA

Downstream 100 bases:

>100_bases
GGAATAGTGATGCTTGAAAAAATCATACGTTTTTCTTTAAAACACCGTTGGTTTGTTCTTTTGTTTACATTTATTATCGC
AGTGCTTGGTGTTTACAATT

Product: cation efflux system HelB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNLLKPIGLSLKLAVFLLGMSSFSLWAEETTHATEENNHQETMEKGPHGGRLFKDGDLALEFLIFERGMPPHFRAYLYKN
GEMILPQKAELIVNLTRFGGKKEQITFIPVENFLQSNQIIEEPHSFDVTIQLNSFGKPLSWHYSTYEGRVKIAPAVLKAA
GIETAVAQEQTIKTQLNAVGKIVTNRDTSAPIYARYSGIIKVMNKNLGDEVTKGDVLATIESNESLQNYEIRSPITGTIV
QKYATNGEFAQNTKPIFEVANLVTVWADFTLYRKDAPLVKPGMEVIVTGDEGKPKSVSTISYISPLGVEDSQTTLARAVL
NNDTRIWLPGMYVNGAIVIKEKIAPVAVLLSALQQMGEQDVVFVQQGDYFEATPVNLGEKDEQWAEVISGLDAGQRYVSK
NSFYIKAEIGKEGASHDH

Sequences:

>Translated_418_residues
MNLLKPIGLSLKLAVFLLGMSSFSLWAEETTHATEENNHQETMEKGPHGGRLFKDGDLALEFLIFERGMPPHFRAYLYKN
GEMILPQKAELIVNLTRFGGKKEQITFIPVENFLQSNQIIEEPHSFDVTIQLNSFGKPLSWHYSTYEGRVKIAPAVLKAA
GIETAVAQEQTIKTQLNAVGKIVTNRDTSAPIYARYSGIIKVMNKNLGDEVTKGDVLATIESNESLQNYEIRSPITGTIV
QKYATNGEFAQNTKPIFEVANLVTVWADFTLYRKDAPLVKPGMEVIVTGDEGKPKSVSTISYISPLGVEDSQTTLARAVL
NNDTRIWLPGMYVNGAIVIKEKIAPVAVLLSALQQMGEQDVVFVQQGDYFEATPVNLGEKDEQWAEVISGLDAGQRYVSK
NSFYIKAEIGKEGASHDH
>Mature_418_residues
MNLLKPIGLSLKLAVFLLGMSSFSLWAEETTHATEENNHQETMEKGPHGGRLFKDGDLALEFLIFERGMPPHFRAYLYKN
GEMILPQKAELIVNLTRFGGKKEQITFIPVENFLQSNQIIEEPHSFDVTIQLNSFGKPLSWHYSTYEGRVKIAPAVLKAA
GIETAVAQEQTIKTQLNAVGKIVTNRDTSAPIYARYSGIIKVMNKNLGDEVTKGDVLATIESNESLQNYEIRSPITGTIV
QKYATNGEFAQNTKPIFEVANLVTVWADFTLYRKDAPLVKPGMEVIVTGDEGKPKSVSTISYISPLGVEDSQTTLARAVL
NNDTRIWLPGMYVNGAIVIKEKIAPVAVLLSALQQMGEQDVVFVQQGDYFEATPVNLGEKDEQWAEVISGLDAGQRYVSK
NSFYIKAEIGKEGASHDH

Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005695
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 46300; Mature: 46300

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLKPIGLSLKLAVFLLGMSSFSLWAEETTHATEENNHQETMEKGPHGGRLFKDGDLAL
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEECCCCEE
EFLIFERGMPPHFRAYLYKNGEMILPQKAELIVNLTRFGGKKEQITFIPVENFLQSNQII
EEEEECCCCCCCEEEEEEECCCEECCCHHHHEEEHHHCCCCCCEEEEEEHHHHHCCCCHH
EEPHSFDVTIQLNSFGKPLSWHYSTYEGRVKIAPAVLKAAGIETAVAQEQTIKTQLNAVG
CCCCCEEEEEEECCCCCCEEEEEECCCCEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHH
KIVTNRDTSAPIYARYSGIIKVMNKNLGDEVTKGDVLATIESNESLQNYEIRSPITGTIV
HEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCHHHHH
QKYATNGEFAQNTKPIFEVANLVTVWADFTLYRKDAPLVKPGMEVIVTGDEGKPKSVSTI
HHHCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEE
SYISPLGVEDSQTTLARAVLNNDTRIWLPGMYVNGAIVIKEKIAPVAVLLSALQQMGEQD
EEECCCCCCCCHHHHHHHHHCCCCEEEECCEEECCEEEEECCCCHHHHHHHHHHHCCCCC
VVFVQQGDYFEATPVNLGEKDEQWAEVISGLDAGQRYVSKNSFYIKAEIGKEGASHDH
EEEEECCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNLLKPIGLSLKLAVFLLGMSSFSLWAEETTHATEENNHQETMEKGPHGGRLFKDGDLAL
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEECCCCEE
EFLIFERGMPPHFRAYLYKNGEMILPQKAELIVNLTRFGGKKEQITFIPVENFLQSNQII
EEEEECCCCCCCEEEEEEECCCEECCCHHHHEEEHHHCCCCCCEEEEEEHHHHHCCCCHH
EEPHSFDVTIQLNSFGKPLSWHYSTYEGRVKIAPAVLKAAGIETAVAQEQTIKTQLNAVG
CCCCCEEEEEEECCCCCCEEEEEECCCCEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHH
KIVTNRDTSAPIYARYSGIIKVMNKNLGDEVTKGDVLATIESNESLQNYEIRSPITGTIV
HEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCHHHHH
QKYATNGEFAQNTKPIFEVANLVTVWADFTLYRKDAPLVKPGMEVIVTGDEGKPKSVSTI
HHHCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEE
SYISPLGVEDSQTTLARAVLNNDTRIWLPGMYVNGAIVIKEKIAPVAVLLSALQQMGEQD
EEECCCCCCCCHHHHHHHHHCCCCEEEECCEEECCEEEEECCCCHHHHHHHHHHHCCCCC
VVFVQQGDYFEATPVNLGEKDEQWAEVISGLDAGQRYVSKNSFYIKAEIGKEGASHDH
EEEEECCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8829543 [H]