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The map label for this gene is ylbC [H]

Identifier: 52841113

GI number: 52841113

Start: 951911

End: 952465

Strand: Reverse

Name: ylbC [H]

Synonym: lpg0877

Alternate gene names: 52841113

Gene position: 952465-951911 (Counterclockwise)

Preceding gene: 52841114

Following gene: 52841112

Centisome position: 28.03

GC content: 37.12

Gene sequence:

>555_bases
ATGAATCTGATAAAAATTAAATCTAAAACCCTATTCATGGTACTTGTATACAGTTTGCTCTCCCCTGCTTATGCAGTATC
ACACCCCAAAAGCACAGTGAATGACACCGCCATTCAAAATGAAATATTAGTTTATATCAATAATTACCGACAACAGCATG
GCCTGGCTCCTCTCAAAATGGATAACCGCATAGTAAAAGAAGCAAAAATTCATTCCATGGATATGGCAAAACACGCGATA
CCATTCGGCCATAAATATTTTAAAAAACGTATTGATAAATTACACACACAAATTAAAAACTCAAATGCAGGGGCTGAAAA
CGTGGCTTACAACTATAAAAATGCCCAGGATGTTGTCAAAAACTGGTTACGTAGCCCAGGACACAAAAGAAATATCGTTG
GGAACTATGACCTTACCGGGGTAGGTATAGCTCGAGATGAAAAGGGGAAAATATATTTTACTCAAATATTCTTAAAAACA
GGAAATAGCCACTATGCCTCCAGAAAACCCTTCCCATCAATTTTTAGTGGTGCCCTCTTCAGTAAGAAAGCATAA

Upstream 100 bases:

>100_bases
TTTTTAGTTCTATCAACCACTGGACAAAAGTGTGTTTTTTAGTAACCATTCAGATCAAAATAATTCCTTTATTCTTAATA
ATAAATTATGAGGATTTCCT

Downstream 100 bases:

>100_bases
AAATTAAAATAGGGTGTTTAACAAAATTTTTGCAATTTTTAAGTGCAATTGAGTGGAATTAATGACAACGTTAGCCTAAT
ATTGAAACATAGACGGCAAT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNLIKIKSKTLFMVLVYSLLSPAYAVSHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKMDNRIVKEAKIHSMDMAKHAI
PFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVKNWLRSPGHKRNIVGNYDLTGVGIARDEKGKIYFTQIFLKT
GNSHYASRKPFPSIFSGALFSKKA

Sequences:

>Translated_184_residues
MNLIKIKSKTLFMVLVYSLLSPAYAVSHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKMDNRIVKEAKIHSMDMAKHAI
PFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVKNWLRSPGHKRNIVGNYDLTGVGIARDEKGKIYFTQIFLKT
GNSHYASRKPFPSIFSGALFSKKA
>Mature_184_residues
MNLIKIKSKTLFMVLVYSLLSPAYAVSHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKMDNRIVKEAKIHSMDMAKHAI
PFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVKNWLRSPGHKRNIVGNYDLTGVGIARDEKGKIYFTQIFLKT
GNSHYASRKPFPSIFSGALFSKKA

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 20898; Mature: 20898

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIKIKSKTLFMVLVYSLLSPAYAVSHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKM
CCEEEECCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHCCEEEEEECHHHHHCCCCCCC
DNRIVKEAKIHSMDMAKHAIPFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVK
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHH
NWLRSPGHKRNIVGNYDLTGVGIARDEKGKIYFTQIFLKTGNSHYASRKPFPSIFSGALF
HHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
SKKA
CCCC
>Mature Secondary Structure
MNLIKIKSKTLFMVLVYSLLSPAYAVSHPKSTVNDTAIQNEILVYINNYRQQHGLAPLKM
CCEEEECCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHCCEEEEEECHHHHHCCCCCCC
DNRIVKEAKIHSMDMAKHAIPFGHKYFKKRIDKLHTQIKNSNAGAENVAYNYKNAQDVVK
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHH
NWLRSPGHKRNIVGNYDLTGVGIARDEKGKIYFTQIFLKTGNSHYASRKPFPSIFSGALF
HHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
SKKA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]