Click here to switch to the map view.

The map label for this gene is 52841005

Identifier: 52841005

GI number: 52841005

Start: 839597

End: 840688

Strand: Reverse

Name: 52841005

Synonym: lpg0768

Alternate gene names: NA

Gene position: 840688-839597 (Counterclockwise)

Preceding gene: 52841006

Following gene: 52841004

Centisome position: 24.74

GC content: 36.81

Gene sequence:

>1092_bases
ATGAGTCAGCCTTTTACAATTGGTCCATTCTCTGTTGAAGAAAATCATCCTCCTATTTTTTTAGCAGAAATAGGTACTTT
TTTTAATCAGGATCTTGGCATAGCTGAACAATTGCTACACAAAATTATAACCATCAGGGATAAAGTACCATACCAACCTC
TTATACTAAAAACAGAAATTTTAAATAACCCAAACATTTGCCTACCTGTTGATTATGAAGAAACCTATACCAGTAAATCC
GGTGAGGTCCGCAAGGAAAACTACCGCTCATTAATTGAGAGAAAAGTACTGCCTTTAGAACATTATAGTATGCTATTTTC
ACTATTAAAGAATGCCAATTTACCCTTCATAGTTTCGATTTATGAATTGGACACTATTGATTTTGCGATAAAGCAGGGTG
CCTGCGCACTCAAAACCTCTTCATCGAACATTGTCCATGTTCCTTTAATTCGTCATCTGGCAAAAACAGGATTACCGCTC
ATTATTGACACTGGAAGATCTTCTTTAACTGATATATGCAAAGCAGTTGAAACAGCAAAAAGTGCCGGATGTGAAAAAAT
TATTATTGAACATAGTCCTGATGGACATCCTGCTTTGCCAGAAGCACATAACCTAAGAATGTTACGAACTTTAAACCAAT
GTTTTTCATTACCAGTTGGTTTATCTGACCATTATAATGGAATTGAAATGTTGTATATGTCTATTGCATTGGGAGCTTCA
ATCCTGGAAAAAGGAGTTCATCTCTATCCAGAAGATATTGATCAGGACATATCACATACTATGGGGATTGAGCAATTAGC
CAAGACTCTTGAAACAATTTACAATTGTTGGCAAGCTTTAGGTCAACCGATGCGAGATCTAGAAGCTCCTATAAAAGGAG
TACTTGGCAGCTCTCAAAGAACTTGTTTGGTTGCAAAGCAAAAACTTCAACCTGGCTCTCTAATTAGCCTTGATAATACA
ACCTTTGCCTTTCCTTGTAAGGGAGTCCCGACCCAATACTGGGATCTGGTAAATGGCTGGGAATTACAAAACAAGGTATC
TATAGGTGAACCCATTAAATGGTCGGATATTAAGCAAAAAAATGATTGTTAG

Upstream 100 bases:

>100_bases
GACAATGAAAACCGAGTTTAATGATAAGCAATTAACTAATGGTATGAAATTACTGGTAGATCATTATTTATTAGAAATTC
ACATATAAGCGAGATAGTCA

Downstream 100 bases:

>100_bases
AAACCCTACTTGGAACTCTCTTACCCCCCCACTTCCTAAATTTGTTTCTTGTGATACAGTCGAGACAAATTTCCTGAAAG
AAAAATTAGGAGAAGACGGC

Product: spore coat polysaccharide biosynthesis protein E (NeuB)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSQPFTIGPFSVEENHPPIFLAEIGTFFNQDLGIAEQLLHKIITIRDKVPYQPLILKTEILNNPNICLPVDYEETYTSKS
GEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPL
IIDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGAS
ILEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQRTCLVAKQKLQPGSLISLDNT
TFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC

Sequences:

>Translated_363_residues
MSQPFTIGPFSVEENHPPIFLAEIGTFFNQDLGIAEQLLHKIITIRDKVPYQPLILKTEILNNPNICLPVDYEETYTSKS
GEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPL
IIDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGAS
ILEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQRTCLVAKQKLQPGSLISLDNT
TFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC
>Mature_362_residues
SQPFTIGPFSVEENHPPIFLAEIGTFFNQDLGIAEQLLHKIITIRDKVPYQPLILKTEILNNPNICLPVDYEETYTSKSG
EVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPLI
IDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGASI
LEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQRTCLVAKQKLQPGSLISLDNTT
FAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC

Specific function: Unknown

COG id: COG2089

COG function: function code M; Sialic acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spsE [H]

Homologues:

Organism=Homo sapiens, GI12056473, Length=314, Percent_Identity=24.8407643312102, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI21357081, Length=285, Percent_Identity=23.5087719298246, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006190
- InterPro:   IPR013785
- InterPro:   IPR013132
- InterPro:   IPR013974 [H]

Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 40568; Mature: 40437

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50844 AFP_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPFTIGPFSVEENHPPIFLAEIGTFFNQDLGIAEQLLHKIITIRDKVPYQPLILKTEI
CCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHH
LNNPNICLPVDYEETYTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSI
CCCCCEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
YELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPLIIDTGRSSLTDICKAVETAK
EEHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH
SAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGAS
HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
ILEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQR
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
TCLVAKQKLQPGSLISLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQK
EEEHHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
NDC
CCC
>Mature Secondary Structure 
SQPFTIGPFSVEENHPPIFLAEIGTFFNQDLGIAEQLLHKIITIRDKVPYQPLILKTEI
CCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHH
LNNPNICLPVDYEETYTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSI
CCCCCEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
YELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPLIIDTGRSSLTDICKAVETAK
EEHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH
SAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGAS
HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
ILEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQR
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
TCLVAKQKLQPGSLISLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQK
EEEHHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
NDC
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]