Click here to switch to the map view.

The map label for this gene is 52840969

Identifier: 52840969

GI number: 52840969

Start: 799065

End: 799703

Strand: Reverse

Name: 52840969

Synonym: lpg0732

Alternate gene names: NA

Gene position: 799703-799065 (Counterclockwise)

Preceding gene: 52840971

Following gene: 52840968

Centisome position: 23.54

GC content: 44.29

Gene sequence:

>639_bases
ATGAGAATTACATTACTTACAACAGCTATATTAGCTACGGGTGTTGCCTACGCCGCTGTACCTGTAGACGGGTGGTATGC
CAGCGCATTTGGAGGTTACACTTATATTCCCCCCAACATATACAATTTCGCTTATGGGGTATTCCGTGATGAGGTGGGAT
ACAATAACGGGTATAACGCCGGAGGACGAGTAGGCTACCAAAGCAACCCAATCCGCTATGAAGTAGAATACACCTATCTC
AGGGGTGAAGCCAGAAAGTTTAATCTTAACTTTATAACACAGCTCGGTGTTACCGGTTTTACCTCCGCCAATACTATCAT
GGCCAATATTTACTATGATTGCCCTGATATGCTGCCAGCCATTGCGCCATTTATTGGATTGGGGATTGGTTATGCCTCTC
TTAGGACAGAGCTTGACAGCATAGGTCCTTTTAGACCATCTTACTTTACCACCAGCGACAGCGCCTTTGCCTACCAGGGA
ACTGTGGGAATAACTTATAATTTCTCCGAAAATTATGCGGCAAATTTGGCTTACCGCTATATCGCAACCGATAATTCGAG
TAATTTTGGAAAAACCTACCAGGCTCATTTGGCCAGCGTGGGAGCAATCTACCGTTTTGATCAAGGAAATTATAAGTAA

Upstream 100 bases:

>100_bases
AATTTAAATTGCTCAATAAAGCGCAATAGAAAACTTGCAAATTTAAGACAAACCGCTAACATGAATCAGTTAAAAAATAA
TAATAATAAAAAGGGATGTC

Downstream 100 bases:

>100_bases
GGATACGCAATGAAGAAGTTAATTCAACTCTCGGTATTATCCGGTTTGCTATTAAGCGGCTCAACTTTTGCCTTCAACCA
GCCTCAAGGCTTCTACGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Surface Antigen Msp4 Family Protein

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRITLLTTAILATGVAYAAVPVDGWYASAFGGYTYIPPNIYNFAYGVFRDEVGYNNGYNAGGRVGYQSNPIRYEVEYTYL
RGEARKFNLNFITQLGVTGFTSANTIMANIYYDCPDMLPAIAPFIGLGIGYASLRTELDSIGPFRPSYFTTSDSAFAYQG
TVGITYNFSENYAANLAYRYIATDNSSNFGKTYQAHLASVGAIYRFDQGNYK

Sequences:

>Translated_212_residues
MRITLLTTAILATGVAYAAVPVDGWYASAFGGYTYIPPNIYNFAYGVFRDEVGYNNGYNAGGRVGYQSNPIRYEVEYTYL
RGEARKFNLNFITQLGVTGFTSANTIMANIYYDCPDMLPAIAPFIGLGIGYASLRTELDSIGPFRPSYFTTSDSAFAYQG
TVGITYNFSENYAANLAYRYIATDNSSNFGKTYQAHLASVGAIYRFDQGNYK
>Mature_212_residues
MRITLLTTAILATGVAYAAVPVDGWYASAFGGYTYIPPNIYNFAYGVFRDEVGYNNGYNAGGRVGYQSNPIRYEVEYTYL
RGEARKFNLNFITQLGVTGFTSANTIMANIYYDCPDMLPAIAPFIGLGIGYASLRTELDSIGPFRPSYFTTSDSAFAYQG
TVGITYNFSENYAANLAYRYIATDNSSNFGKTYQAHLASVGAIYRFDQGNYK

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23421; Mature: 23421

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLLTTAILATGVAYAAVPVDGWYASAFGGYTYIPPNIYNFAYGVFRDEVGYNNGYNA
CEEEHEEHHHHHHCCEEEEEECCCCCHHHCCCEEECCCCHHHHHHHHHHHCCCCCCCCCC
GGRVGYQSNPIRYEVEYTYLRGEARKFNLNFITQLGVTGFTSANTIMANIYYDCPDMLPA
CCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHH
IAPFIGLGIGYASLRTELDSIGPFRPSYFTTSDSAFAYQGTVGITYNFSENYAANLAYRY
HHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCCCEEEECEEEEEEECCCCCEEEEEEEE
IATDNSSNFGKTYQAHLASVGAIYRFDQGNYK
EEECCCCCCCHHHHHHHHHHCEEEEECCCCCC
>Mature Secondary Structure
MRITLLTTAILATGVAYAAVPVDGWYASAFGGYTYIPPNIYNFAYGVFRDEVGYNNGYNA
CEEEHEEHHHHHHCCEEEEEECCCCCHHHCCCEEECCCCHHHHHHHHHHHCCCCCCCCCC
GGRVGYQSNPIRYEVEYTYLRGEARKFNLNFITQLGVTGFTSANTIMANIYYDCPDMLPA
CCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHH
IAPFIGLGIGYASLRTELDSIGPFRPSYFTTSDSAFAYQGTVGITYNFSENYAANLAYRY
HHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCCCEEEECEEEEEEECCCCCEEEEEEEE
IATDNSSNFGKTYQAHLASVGAIYRFDQGNYK
EEECCCCCCCHHHHHHHHHHCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA