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The map label for this gene is 52840904

Identifier: 52840904

GI number: 52840904

Start: 717379

End: 718248

Strand: Reverse

Name: 52840904

Synonym: lpg0667

Alternate gene names: NA

Gene position: 718248-717379 (Counterclockwise)

Preceding gene: 52840905

Following gene: 52840903

Centisome position: 21.14

GC content: 37.47

Gene sequence:

>870_bases
ATGTATTCAAATCATTCTATCGATCAAGCCGCGCCTTATTCTGGATGTTCAGGCATTGGATTGCGGCTTGAACACATCGA
CGATATTTTAAAGGAACAGCCCACAGTTGATTATTTTGAAGTCCTGGCTGATAACTATATGAAACAATCGGGAGTTCAAT
TTAAACAATTGCTCAAGATTGCAGAATTTTATCCAGTGAGTTTACACAGCGTTGGCTTATCTATCGCCACATCCTCTGAA
CCTGATTATCAATATTTGCGGCAAATAAAAGATTTGGCGCATTGTTTAAACTCCAAGCTAATATCAGATCATTTATGCTG
GACCCATGCCAATCAATTTTTTACCCATGAATTGATACCGTTTCCCTATACTGAAGAAACGCTCTCATTCATTATTGAAA
AAACAAACCGCGTTCAGGAATACCTAAACCAGCCAATAATGTACGAGAACGTATCAAGGTACGTCACTTATCGACAAAAT
ACATTATCTGAAGCCGAGTTTCTCAATGAGTTAAGCACTGCTACAGGTTGTGGTATCTTATTGGATATCAATAATTTATA
CGTGAATTGGTATAATCATGGTGATGACCCGGATAAGTATCTTCATTCGATGAATACCAAAAACGTATGGCAGATGCATC
TTGGGGGATTTTCAAAACAAGAGGGATATTTGCTGGATAGTCATAGTGATAAAGTATACCAAGACGTTTGGCAACTTTAT
GAAAAGGCTCAAAATCTCTTTATAAACACGCCAACAGTTATCGAGTGGGATAATGACTTGCCAGACTTTTCACTCCTGTA
TGAAGAAATGTGTAAAGCAAAAACCATAATAAAGTGTGTGGCAGAAAGGAGTATGAATCATTATGCGTAA

Upstream 100 bases:

>100_bases
CTGGCCAATCTAAAACAGATGGTTCAACAACTGACTGGATTTATCTGCCCAAAGGTACTTGTGAAAAGCTGGTTAACGGC
ACAGTTAAAAGCTAATTAGA

Downstream 100 bases:

>100_bases
TACTCTGCTTGAAACAATTCAAAAGGAATGGATAGCACAATTCAAAGAGGAGGCACTATCAAGCCCCTTAAAAAACAGGT
TCGCTCGATCCAATTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MYSNHSIDQAAPYSGCSGIGLRLEHIDDILKEQPTVDYFEVLADNYMKQSGVQFKQLLKIAEFYPVSLHSVGLSIATSSE
PDYQYLRQIKDLAHCLNSKLISDHLCWTHANQFFTHELIPFPYTEETLSFIIEKTNRVQEYLNQPIMYENVSRYVTYRQN
TLSEAEFLNELSTATGCGILLDINNLYVNWYNHGDDPDKYLHSMNTKNVWQMHLGGFSKQEGYLLDSHSDKVYQDVWQLY
EKAQNLFINTPTVIEWDNDLPDFSLLYEEMCKAKTIIKCVAERSMNHYA

Sequences:

>Translated_289_residues
MYSNHSIDQAAPYSGCSGIGLRLEHIDDILKEQPTVDYFEVLADNYMKQSGVQFKQLLKIAEFYPVSLHSVGLSIATSSE
PDYQYLRQIKDLAHCLNSKLISDHLCWTHANQFFTHELIPFPYTEETLSFIIEKTNRVQEYLNQPIMYENVSRYVTYRQN
TLSEAEFLNELSTATGCGILLDINNLYVNWYNHGDDPDKYLHSMNTKNVWQMHLGGFSKQEGYLLDSHSDKVYQDVWQLY
EKAQNLFINTPTVIEWDNDLPDFSLLYEEMCKAKTIIKCVAERSMNHYA
>Mature_289_residues
MYSNHSIDQAAPYSGCSGIGLRLEHIDDILKEQPTVDYFEVLADNYMKQSGVQFKQLLKIAEFYPVSLHSVGLSIATSSE
PDYQYLRQIKDLAHCLNSKLISDHLCWTHANQFFTHELIPFPYTEETLSFIIEKTNRVQEYLNQPIMYENVSRYVTYRQN
TLSEAEFLNELSTATGCGILLDINNLYVNWYNHGDDPDKYLHSMNTKNVWQMHLGGFSKQEGYLLDSHSDKVYQDVWQLY
EKAQNLFINTPTVIEWDNDLPDFSLLYEEMCKAKTIIKCVAERSMNHYA

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 33634; Mature: 33634

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSNHSIDQAAPYSGCSGIGLRLEHIDDILKEQPTVDYFEVLADNYMKQSGVQFKQLLKI
CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
AEFYPVSLHSVGLSIATSSEPDYQYLRQIKDLAHCLNSKLISDHLCWTHANQFFTHELIP
HHHCCCHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FPYTEETLSFIIEKTNRVQEYLNQPIMYENVSRYVTYRQNTLSEAEFLNELSTATGCGIL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LDINNLYVNWYNHGDDPDKYLHSMNTKNVWQMHLGGFSKQEGYLLDSHSDKVYQDVWQLY
EEECEEEEEEECCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH
EKAQNLFINTPTVIEWDNDLPDFSLLYEEMCKAKTIIKCVAERSMNHYA
HHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYSNHSIDQAAPYSGCSGIGLRLEHIDDILKEQPTVDYFEVLADNYMKQSGVQFKQLLKI
CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
AEFYPVSLHSVGLSIATSSEPDYQYLRQIKDLAHCLNSKLISDHLCWTHANQFFTHELIP
HHHCCCHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FPYTEETLSFIIEKTNRVQEYLNQPIMYENVSRYVTYRQNTLSEAEFLNELSTATGCGIL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LDINNLYVNWYNHGDDPDKYLHSMNTKNVWQMHLGGFSKQEGYLLDSHSDKVYQDVWQLY
EEECEEEEEEECCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH
EKAQNLFINTPTVIEWDNDLPDFSLLYEEMCKAKTIIKCVAERSMNHYA
HHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA