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The map label for this gene is 52840867

Identifier: 52840867

GI number: 52840867

Start: 666977

End: 668044

Strand: Reverse

Name: 52840867

Synonym: lpg0630

Alternate gene names: NA

Gene position: 668044-666977 (Counterclockwise)

Preceding gene: 52840868

Following gene: 52840866

Centisome position: 19.66

GC content: 44.19

Gene sequence:

>1068_bases
ATGAATATTAAGTACAGACTACAACAAGGATTTTCATTAGTCGAGTTAATGATAGCCACCTTGGTTGGACTGATACTCAC
TTATTCAATTTTACAAATATACCTGGCACAAACCCAACTTTACAAAGCATCGAACTCTCAGGATCTTATTCAAAGTACTG
AAAATGCCATATCCAATTTACTCATACCGATGATAAGATCGGCTGGATTTGCCGGCTGTGGATCCATTATCACCGCAGTT
TCCAGCCTAAATGCTGGGGGCCCAAGGCCTTTGGGAATATTGAATACAACGCCAACAATCCTTATGGGTTACAATGGCAG
CGGAGCGAGCTTCACAATAACCCAAAGCAATCCTGCAAATAGCACCAATGCCAGTCATTGGTCACCCGCATTAGATTCCA
CCCTTGTTGGCAATGCTCAACAAGGTAGTGATGTGTTGGTAGTATTAGGCTCTACCTCTGACAGCTATCCAACAGGAATA
ACCGCGATTGATCCCGGCAGCAATACCTTTGTAGTTCAAGGCACTAGCGGGATGTCCCTTACCTCTGGAATGTTTGGAGC
GGTCTCTGATTGTGGTAAAACCGTAATATTTCAAATTACCGGAGTAGCAGGAACCACGATTACTCATGATGCAGGCGCTG
GGGTGCTACAAAATGCAAGCAGTGCCTTCCCTGTCAATTTTCAAACCGGCTCCCAATTCATTCCCATCCAACAAACGGCA
TTTTTTGTGGGTCAAGGTCAAGGTGGGCAAAGCGCATTAATGCGGGCCTCTCTCGTTGGCAACAACTGGACAATACAGCC
ATTAGTTCCTGGGGTGGAAATAATGAAAGTCCAGTATGGTATTGGCAATAATGGAGTCATTACTCGATACGTCTCTGCTA
ATGCAGTAACTGATTGGGCACAGGTTTATGCCATTCGTTTGGGATTTTTGATAGCAGGTCAACTCGGATCAGGAAGCTTG
ACAACCAGACAATACAACGTTTTGGATACGCAAGTCACTGTACCTGCTGATAACCGCTTAAGACATGTATTTGAATTAAC
CATCAACTTGAGGAATTCGATATCATGA

Upstream 100 bases:

>100_bases
CTGTACAATGGGATGATAGTAAAGCACAAAATGAGTTAGGGGCAAGCAGCGCTTCTTCAGGAACTGCCAATTTCGTTCAA
TTCAGAGTACAGAGTCAGAT

Downstream 100 bases:

>100_bases
ACGTATCTTTCACAGCTCAATATTCAAAACAGCGAGGTTACGTCCTGATAACCTCTCTTGTGCTTATGTCAATGCTTACC
GTTTTAGCCCTGACCCAGAT

Product: type IV fimbrial biogenesis PilW related protein, transmembrane)

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein PilW-Like; Di-Trans-Poly-Cis-Decaprenylcistransferase; Tfp Pilus Assembly Protein PilW; Prepilin-Type Cleavage/Methylation-Like

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNIKYRLQQGFSLVELMIATLVGLILTYSILQIYLAQTQLYKASNSQDLIQSTENAISNLLIPMIRSAGFAGCGSIITAV
SSLNAGGPRPLGILNTTPTILMGYNGSGASFTITQSNPANSTNASHWSPALDSTLVGNAQQGSDVLVVLGSTSDSYPTGI
TAIDPGSNTFVVQGTSGMSLTSGMFGAVSDCGKTVIFQITGVAGTTITHDAGAGVLQNASSAFPVNFQTGSQFIPIQQTA
FFVGQGQGGQSALMRASLVGNNWTIQPLVPGVEIMKVQYGIGNNGVITRYVSANAVTDWAQVYAIRLGFLIAGQLGSGSL
TTRQYNVLDTQVTVPADNRLRHVFELTINLRNSIS

Sequences:

>Translated_355_residues
MNIKYRLQQGFSLVELMIATLVGLILTYSILQIYLAQTQLYKASNSQDLIQSTENAISNLLIPMIRSAGFAGCGSIITAV
SSLNAGGPRPLGILNTTPTILMGYNGSGASFTITQSNPANSTNASHWSPALDSTLVGNAQQGSDVLVVLGSTSDSYPTGI
TAIDPGSNTFVVQGTSGMSLTSGMFGAVSDCGKTVIFQITGVAGTTITHDAGAGVLQNASSAFPVNFQTGSQFIPIQQTA
FFVGQGQGGQSALMRASLVGNNWTIQPLVPGVEIMKVQYGIGNNGVITRYVSANAVTDWAQVYAIRLGFLIAGQLGSGSL
TTRQYNVLDTQVTVPADNRLRHVFELTINLRNSIS
>Mature_355_residues
MNIKYRLQQGFSLVELMIATLVGLILTYSILQIYLAQTQLYKASNSQDLIQSTENAISNLLIPMIRSAGFAGCGSIITAV
SSLNAGGPRPLGILNTTPTILMGYNGSGASFTITQSNPANSTNASHWSPALDSTLVGNAQQGSDVLVVLGSTSDSYPTGI
TAIDPGSNTFVVQGTSGMSLTSGMFGAVSDCGKTVIFQITGVAGTTITHDAGAGVLQNASSAFPVNFQTGSQFIPIQQTA
FFVGQGQGGQSALMRASLVGNNWTIQPLVPGVEIMKVQYGIGNNGVITRYVSANAVTDWAQVYAIRLGFLIAGQLGSGSL
TTRQYNVLDTQVTVPADNRLRHVFELTINLRNSIS

Specific function: Unknown

COG id: COG4966

COG function: function code NU; Tfp pilus assembly protein PilW

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37200; Mature: 37200

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKYRLQQGFSLVELMIATLVGLILTYSILQIYLAQTQLYKASNSQDLIQSTENAISNL
CCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LIPMIRSAGFAGCGSIITAVSSLNAGGPRPLGILNTTPTILMGYNGSGASFTITQSNPAN
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCC
STNASHWSPALDSTLVGNAQQGSDVLVVLGSTSDSYPTGITAIDPGSNTFVVQGTSGMSL
CCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE
TSGMFGAVSDCGKTVIFQITGVAGTTITHDAGAGVLQNASSAFPVNFQTGSQFIPIQQTA
CCCCHHHHHHCCCEEEEEEECCCCCEEECCCCCHHHHCCCCCCEEEECCCCEEEEEEHEE
FFVGQGQGGQSALMRASLVGNNWTIQPLVPGVEIMKVQYGIGNNGVITRYVSANAVTDWA
EEEECCCCCHHHHHHHEECCCCEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCHHHHH
QVYAIRLGFLIAGQLGSGSLTTRQYNVLDTQVTVPADNRLRHVFELTINLRNSIS
HHHHHHHHHEEEECCCCCCEEEEEEEEEEEEEECCCCHHHEEEEEEEEEHHCCCC
>Mature Secondary Structure
MNIKYRLQQGFSLVELMIATLVGLILTYSILQIYLAQTQLYKASNSQDLIQSTENAISNL
CCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LIPMIRSAGFAGCGSIITAVSSLNAGGPRPLGILNTTPTILMGYNGSGASFTITQSNPAN
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCC
STNASHWSPALDSTLVGNAQQGSDVLVVLGSTSDSYPTGITAIDPGSNTFVVQGTSGMSL
CCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE
TSGMFGAVSDCGKTVIFQITGVAGTTITHDAGAGVLQNASSAFPVNFQTGSQFIPIQQTA
CCCCHHHHHHCCCEEEEEEECCCCCEEECCCCCHHHHCCCCCCEEEECCCCEEEEEEHEE
FFVGQGQGGQSALMRASLVGNNWTIQPLVPGVEIMKVQYGIGNNGVITRYVSANAVTDWA
EEEECCCCCHHHHHHHEECCCCEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCHHHHH
QVYAIRLGFLIAGQLGSGSLTTRQYNVLDTQVTVPADNRLRHVFELTINLRNSIS
HHHHHHHHHEEEECCCCCCEEEEEEEEEEEEEECCCCHHHEEEEEEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA