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The map label for this gene is 52840636

Identifier: 52840636

GI number: 52840636

Start: 433098

End: 433637

Strand: Reverse

Name: 52840636

Synonym: lpg0391

Alternate gene names: NA

Gene position: 433637-433098 (Counterclockwise)

Preceding gene: 52840637

Following gene: 52840635

Centisome position: 12.76

GC content: 37.41

Gene sequence:

>540_bases
ATGGCTTATGAATTAAAACAGCAAAATTTATTCAGAAATGCCAAAATTGGCCAGAACTTACAAGCACAGCAAAATGACAA
GATTAGAAGCGATCAAATTTTCTGGATAGATGCAGACTCCCCTTATCCGCCCATTCAAGCTTACTTAAAAAAACTTATCT
CTTTGGGCAATATTCTGAATCAAACCATGTATCTTGGTTTAGCAGAATTTGAAACTCATTTTGCAATTTATCTCCCTGGA
ACCTTTTATAGAAAGCACATTGATCAATTTGAAAGTACAAAAACCAGGAAAATATCATTTGTCTATTATTTGAATGACAC
TTGGCAAAAAGAATTTGGTGGCGAATTGTTACTCTACAATATTGAAGATGAGCTCATTCAAAACATTTCTCCATTGGGGA
ATCGGTTCGTCTGTTTTGATAGTCAATTACCGCACGAAGTCTACCCAACTCAGCGAACGCGCTTCAGTATGACAGGCTGG
ATGAAAACACGCTCAACCTCCGTACTGGCCGACAATAAACTGACCAAAATAACCCAGTAG

Upstream 100 bases:

>100_bases
GTTGTTTAATCCGGACTTAATCGCCCATAATATTTGTACTCAAGGCTTTCATATCATTGATGAATTTCTGGAAGAGGCAC
ACTACTGCTCTTTACGAAAC

Downstream 100 bases:

>100_bases
CACTTTATACGCTGTTCTATAAAAAAATGAATAATTATTTTTTAACTTCACAACAGCTATTGAACTTTAATTTAAGTTGA
TATTAAATGAAACACTATGA

Product: SM20-related protein

Products: NA

Alternate protein names: 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Alpha Subunit; Proline Hydroxylase; Oxidoreductase; SM-20 Domain-Containing Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxygenase; SM-20-Related Protein; SM-20-Like Protein; 2OG-Fe(II) Oxygenase Family Protein; SM-20 Domain Protein; Egl Nine-Like Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; 2OG-Fe(II) Oxygenase Family; 2og-Fe(Ii) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit Homologue

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAYELKQQNLFRNAKIGQNLQAQQNDKIRSDQIFWIDADSPYPPIQAYLKKLISLGNILNQTMYLGLAEFETHFAIYLPG
TFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQNISPLGNRFVCFDSQLPHEVYPTQRTRFSMTGW
MKTRSTSVLADNKLTKITQ

Sequences:

>Translated_179_residues
MAYELKQQNLFRNAKIGQNLQAQQNDKIRSDQIFWIDADSPYPPIQAYLKKLISLGNILNQTMYLGLAEFETHFAIYLPG
TFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQNISPLGNRFVCFDSQLPHEVYPTQRTRFSMTGW
MKTRSTSVLADNKLTKITQ
>Mature_178_residues
AYELKQQNLFRNAKIGQNLQAQQNDKIRSDQIFWIDADSPYPPIQAYLKKLISLGNILNQTMYLGLAEFETHFAIYLPGT
FYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQNISPLGNRFVCFDSQLPHEVYPTQRTRFSMTGWM
KTRSTSVLADNKLTKITQ

Specific function: Unknown

COG id: COG3751

COG function: function code O; Predicted proline hydroxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21050; Mature: 20919

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYELKQQNLFRNAKIGQNLQAQQNDKIRSDQIFWIDADSPYPPIQAYLKKLISLGNILN
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
QTMYLGLAEFETHFAIYLPGTFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYN
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHCCCCEEEEE
IEDELIQNISPLGNRFVCFDSQLPHEVYPTQRTRFSMTGWMKTRSTSVLADNKLTKITQ
CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEHHCEECCCCEEEECCCCCCCCC
>Mature Secondary Structure 
AYELKQQNLFRNAKIGQNLQAQQNDKIRSDQIFWIDADSPYPPIQAYLKKLISLGNILN
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
QTMYLGLAEFETHFAIYLPGTFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYN
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHCCCCEEEEE
IEDELIQNISPLGNRFVCFDSQLPHEVYPTQRTRFSMTGWMKTRSTSVLADNKLTKITQ
CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEHHCEECCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA