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The map label for this gene is smpA

Identifier: 52840617

GI number: 52840617

Start: 410771

End: 411115

Strand: Reverse

Name: smpA

Synonym: lpg0372

Alternate gene names: 52840617

Gene position: 411115-410771 (Counterclockwise)

Preceding gene: 52840619

Following gene: 52840612

Centisome position: 12.1

GC content: 35.94

Gene sequence:

>345_bases
ATGGCGAAATTTTTCATGGTAGGCAAAAAAATGCGAATAATGACTTTTTTTATTTGTTTCATTTTAACATTAACCTTAAC
CCAATGTGCATCATATGACTTCTCAAGACGCATTACTCAGCAAGGTAATTTGTTGCCTCAATCCAAAATTGCCCGGTTAA
AAACAGGCATGAGTAAGAATGACGTTGCAATCTTAATGGGTACCAGCATAATGAGTCCAACATTCAACAATGATAGGTGG
GATTATGCTTATACCTGGCGACGAGGCAAAGGTAACCTGGAAATTCGTAATGTTGTGTTATATTTTTCCAGAGGTTCTTT
AGTAAAAATAGAACATAAGCCGTAA

Upstream 100 bases:

>100_bases
CTAAAAACCATTAGCGGCCTTAAAACTTAGTCTGGCCGAATAATGGCAAATACCAAATTCCACATGATGACAGGTGCCTT
TCAATAAATGACATGTTATT

Downstream 100 bases:

>100_bases
TTTAATATCTCCCCCTTGCCTAAGTGATTAGACAAGGGGAAAATTGTTTTTTAAGAGTTCAGTGTAGATTAAAATGCCTA
ATTTGCCTCTATTTTTTAAA

Product: small protein A, tmRNA-binding

Products: NA

Alternate protein names: SmpA/OmlA; SmpA/OmlA Domain-Containing Protein; Small Protein A

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAKFFMVGKKMRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKNDVAILMGTSIMSPTFNNDRW
DYAYTWRRGKGNLEIRNVVLYFSRGSLVKIEHKP

Sequences:

>Translated_114_residues
MAKFFMVGKKMRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKNDVAILMGTSIMSPTFNNDRW
DYAYTWRRGKGNLEIRNVVLYFSRGSLVKIEHKP
>Mature_113_residues
AKFFMVGKKMRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKNDVAILMGTSIMSPTFNNDRWD
YAYTWRRGKGNLEIRNVVLYFSRGSLVKIEHKP

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13256; Mature: 13125

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFFMVGKKMRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKN
CCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCC
DVAILMGTSIMSPTFNNDRWDYAYTWRRGKGNLEIRNVVLYFSRGSLVKIEHKP
CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCC
>Mature Secondary Structure 
AKFFMVGKKMRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKN
CCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCC
DVAILMGTSIMSPTFNNDRWDYAYTWRRGKGNLEIRNVVLYFSRGSLVKIEHKP
CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA