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The map label for this gene is 52840447

Identifier: 52840447

GI number: 52840447

Start: 222394

End: 222978

Strand: Reverse

Name: 52840447

Synonym: lpg0192

Alternate gene names: NA

Gene position: 222978-222394 (Counterclockwise)

Preceding gene: 52840448

Following gene: 52840445

Centisome position: 6.56

GC content: 33.33

Gene sequence:

>585_bases
GTGAGGAGATTTTTAATGAAAAATAAACTACTTCCCAATTTAATCATCATCACTCTTGCCGCTACAATATATGCTAACTC
CATAAACGTTCAGGCGAAACAAAATGATCAAATACAAAATAGTAACGAACAATTAACCCAGGATCCATTTGATACTGATC
CTTTTTTTCAATCACATGATGATGTTCTGCTGCAAATACACAAAATGCAACAAGCTATGGATCAATTTATCAAAAGTCAA
TTTTCACAAATGCAAAATACCCTTGCAAACGATCCTCATCACAATCCCTTTGGCAGTGCAAAAAATATTCAAATTACAGA
GAATAAAGATGAGATTATTTATAAGATAAAACTACCGCAAGGTTCTGATAGTAAAGTGGATATTACCGTTAAAAATGGGC
AGTTAGTTCTTAGCGCTAACGTCACTCAGAAAATCACCCGTGAACAAGATAATAACAAAAGTGTCAGTTTCTCCCAAAGC
AATTACATGCAATCATTTCCATTGCCCCAGAGCTATGATCCGAAGTCCATGGTCACAAAAATGAAAGACTCAAATTTAAT
TGTTACTTTTAAAAAAAATTCTTAA

Upstream 100 bases:

>100_bases
ATAAAATGAAAGAGGGCAGGTTATGCAAGAGGGCTAATGAGTGGATTGAAGTAAAAACATCCATATCAAATAGAGATAGA
ATTTTTTATAAACAAATCTT

Downstream 100 bases:

>100_bases
CCGCATTATCTGCTTAATTAAATAACCTGCTAAAACAACCATGGGAAAGGATTGATTATACAGTTTGATGCCGGCTTGAA
ATTTTGATTTTCTGCAGCGC

Product: heat shock hsp20

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRRFLMKNKLLPNLIIITLAATIYANSINVQAKQNDQIQNSNEQLTQDPFDTDPFFQSHDDVLLQIHKMQQAMDQFIKSQ
FSQMQNTLANDPHHNPFGSAKNIQITENKDEIIYKIKLPQGSDSKVDITVKNGQLVLSANVTQKITREQDNNKSVSFSQS
NYMQSFPLPQSYDPKSMVTKMKDSNLIVTFKKNS

Sequences:

>Translated_194_residues
MRRFLMKNKLLPNLIIITLAATIYANSINVQAKQNDQIQNSNEQLTQDPFDTDPFFQSHDDVLLQIHKMQQAMDQFIKSQ
FSQMQNTLANDPHHNPFGSAKNIQITENKDEIIYKIKLPQGSDSKVDITVKNGQLVLSANVTQKITREQDNNKSVSFSQS
NYMQSFPLPQSYDPKSMVTKMKDSNLIVTFKKNS
>Mature_194_residues
MRRFLMKNKLLPNLIIITLAATIYANSINVQAKQNDQIQNSNEQLTQDPFDTDPFFQSHDDVLLQIHKMQQAMDQFIKSQ
FSQMQNTLANDPHHNPFGSAKNIQITENKDEIIYKIKLPQGSDSKVDITVKNGQLVLSANVTQKITREQDNNKSVSFSQS
NYMQSFPLPQSYDPKSMVTKMKDSNLIVTFKKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22212; Mature: 22212

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLMKNKLLPNLIIITLAATIYANSINVQAKQNDQIQNSNEQLTQDPFDTDPFFQSHD
CCCHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCC
DVLLQIHKMQQAMDQFIKSQFSQMQNTLANDPHHNPFGSAKNIQITENKDEIIYKIKLPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCC
GSDSKVDITVKNGQLVLSANVTQKITREQDNNKSVSFSQSNYMQSFPLPQSYDPKSMVTK
CCCCEEEEEEECCEEEEECCCHHHHHHCCCCCCCEEECCCCCHHCCCCCCCCCHHHHHHH
MKDSNLIVTFKKNS
HCCCCEEEEEECCC
>Mature Secondary Structure
MRRFLMKNKLLPNLIIITLAATIYANSINVQAKQNDQIQNSNEQLTQDPFDTDPFFQSHD
CCCHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCC
DVLLQIHKMQQAMDQFIKSQFSQMQNTLANDPHHNPFGSAKNIQITENKDEIIYKIKLPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCC
GSDSKVDITVKNGQLVLSANVTQKITREQDNNKSVSFSQSNYMQSFPLPQSYDPKSMVTK
CCCCEEEEEEECCEEEEECCCHHHHHHCCCCCCCEEECCCCCHHCCCCCCCCCHHHHHHH
MKDSNLIVTFKKNS
HCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA