Click here to switch to the map view.

The map label for this gene is 52840420

Identifier: 52840420

GI number: 52840420

Start: 195663

End: 196118

Strand: Reverse

Name: 52840420

Synonym: lpg0165

Alternate gene names: NA

Gene position: 196118-195663 (Counterclockwise)

Preceding gene: 52840421

Following gene: 52840419

Centisome position: 5.77

GC content: 35.09

Gene sequence:

>456_bases
ATGCCAGATATTACACATTACCTTAAACCCATGGTTTTATTTTCAGGACTATTGGTTGCTACTTTTGCCATGGCCGAAGC
AACAAAAGCTGAGGAAACTTCTACTGTAAAATTAAGTACTATTCTTCAACAGTTGTCTGACCAGGGGTATAAAAACATTC
ATGACGCTGAAATTGACGATGGCGTATTGACTGTTGAAGGCAGCAATGAACAAGGCGTTAAGTTTGAAATTCACATCGAT
CCAGCTACTGGCAAGATTTTAAAAAAACAAGAACATCCACAACCAAAATATTCCATCATAGACATTACCAAAAAAATTGA
AAATGAGGGTAAATTTAAAATCATTGAAATTGAGTTTGATGAAGGTATTTATAAAATAAAAGGTGAAACAGCCAGCCATG
AAAAAAAGAAGCTATATATCGACCCCAATACCGGGGAAGCCAAAACAAATCATTAA

Upstream 100 bases:

>100_bases
AGTTAAACAATAATTTTTTAACACCAAACCTCATCAGGCGATTCTTTTTTTGCGATTTATTTGAATTTTAATACCATACT
ATCAATAGGAGATAAGCAGG

Downstream 100 bases:

>100_bases
TCCCATATAAAGGGGCAAGCCTTTCTTTTTTCCTTAGTATGCCCAATTATTCTCCCTAGAGGAAAGGAAGAGAGCTGTTT
CTACTCAGCTCTTTTATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPDITHYLKPMVLFSGLLVATFAMAEATKAEETSTVKLSTILQQLSDQGYKNIHDAEIDDGVLTVEGSNEQGVKFEIHID
PATGKILKKQEHPQPKYSIIDITKKIENEGKFKIIEIEFDEGIYKIKGETASHEKKKLYIDPNTGEAKTNH

Sequences:

>Translated_151_residues
MPDITHYLKPMVLFSGLLVATFAMAEATKAEETSTVKLSTILQQLSDQGYKNIHDAEIDDGVLTVEGSNEQGVKFEIHID
PATGKILKKQEHPQPKYSIIDITKKIENEGKFKIIEIEFDEGIYKIKGETASHEKKKLYIDPNTGEAKTNH
>Mature_150_residues
PDITHYLKPMVLFSGLLVATFAMAEATKAEETSTVKLSTILQQLSDQGYKNIHDAEIDDGVLTVEGSNEQGVKFEIHIDP
ATGKILKKQEHPQPKYSIIDITKKIENEGKFKIIEIEFDEGIYKIKGETASHEKKKLYIDPNTGEAKTNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16928; Mature: 16797

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDITHYLKPMVLFSGLLVATFAMAEATKAEETSTVKLSTILQQLSDQGYKNIHDAEIDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCC
GVLTVEGSNEQGVKFEIHIDPATGKILKKQEHPQPKYSIIDITKKIENEGKFKIIEIEFD
CEEEEECCCCCCEEEEEEECCCCCCHHHCCCCCCCCEEEEEHHHHHCCCCCEEEEEEEEC
EGIYKIKGETASHEKKKLYIDPNTGEAKTNH
CCEEEEECCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PDITHYLKPMVLFSGLLVATFAMAEATKAEETSTVKLSTILQQLSDQGYKNIHDAEIDD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCC
GVLTVEGSNEQGVKFEIHIDPATGKILKKQEHPQPKYSIIDITKKIENEGKFKIIEIEFD
CEEEEECCCCCCEEEEEEECCCCCCHHHCCCCCCCCEEEEEHHHHHCCCCCEEEEEEEEC
EGIYKIKGETASHEKKKLYIDPNTGEAKTNH
CCEEEEECCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA