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The map label for this gene is cc4 [H]

Identifier: 52840379

GI number: 52840379

Start: 142195

End: 142797

Strand: Reverse

Name: cc4 [H]

Synonym: lpg0124

Alternate gene names: 52840379

Gene position: 142797-142195 (Counterclockwise)

Preceding gene: 52840382

Following gene: 52840378

Centisome position: 4.2

GC content: 41.79

Gene sequence:

>603_bases
ATGAAAAAATTAGCACTCGTATTAATCCTGTGCTCTTCATCAGTGATTTTTGCCCAGGAAAACCCGCAAGAGGCTGGACA
AAATAAGTCAACAGTCTGTACCGCCTGTCATGGTCCGCAAGGTATTAGTACGAATCCCGAATGGCCCAATCTTGCCGGCC
AGCATGAAAAATATTTTGTGAAACAATTGAAAGATATAAAAGAAGGTAAGTCGCGCTCTGCGCCCACTATGACTGCAATA
GTTGCTAATATGAATGAACAGGATATGGATGACTTGGCAGCCTATTATGCTAAAATGCCCGTTGCTGAAGGTTCAACCCC
TGAAAAATATTTAAAAAGAGGCGAACAACTTTACAGAGGTGGTGATTTAAACAAACACATCGCGGCCTGTATAGCCTGCC
ATGGTCCTAAAGGAAGTGGAAACGCTCAAGCAGGCTTTCCCCTGCTTTCTGGTCAGCATGCAGCTTATACTATAATGCAA
CTGCAAGCATTTAAAGACGGGAAGCGAACGAATGACTTAAATCAAATTATGCAAGATATCAGTAGTAAAATGAGCCCAGA
AGATATGGAAGCCGTTGCTTATTATATTCAAGGGTTATATTGA

Upstream 100 bases:

>100_bases
GCTTTAGAATATAAATTGATTGGCATAAGATATCATTTTAGTTTTGGGATTTTGACCCAGGCAGTGTACCATTAATTGAC
TAAATTATTATGAGAAATCC

Downstream 100 bases:

>100_bases
GGAATTGACTATGTTTAAAAAATTAATTGCCCTATTATTTCTTATGCCAATGACTGCTTTGGCAACTCAATTTATTGAAG
GCAAAGATTATCAAACCGTT

Product: cytochrome c4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKKLALVLILCSSSVIFAQENPQEAGQNKSTVCTACHGPQGISTNPEWPNLAGQHEKYFVKQLKDIKEGKSRSAPTMTAI
VANMNEQDMDDLAAYYAKMPVAEGSTPEKYLKRGEQLYRGGDLNKHIAACIACHGPKGSGNAQAGFPLLSGQHAAYTIMQ
LQAFKDGKRTNDLNQIMQDISSKMSPEDMEAVAYYIQGLY

Sequences:

>Translated_200_residues
MKKLALVLILCSSSVIFAQENPQEAGQNKSTVCTACHGPQGISTNPEWPNLAGQHEKYFVKQLKDIKEGKSRSAPTMTAI
VANMNEQDMDDLAAYYAKMPVAEGSTPEKYLKRGEQLYRGGDLNKHIAACIACHGPKGSGNAQAGFPLLSGQHAAYTIMQ
LQAFKDGKRTNDLNQIMQDISSKMSPEDMEAVAYYIQGLY
>Mature_200_residues
MKKLALVLILCSSSVIFAQENPQEAGQNKSTVCTACHGPQGISTNPEWPNLAGQHEKYFVKQLKDIKEGKSRSAPTMTAI
VANMNEQDMDDLAAYYAKMPVAEGSTPEKYLKRGEQLYRGGDLNKHIAACIACHGPKGSGNAQAGFPLLSGQHAAYTIMQ
LQAFKDGKRTNDLNQIMQDISSKMSPEDMEAVAYYIQGLY

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21863; Mature: 21863

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLALVLILCSSSVIFAQENPQEAGQNKSTVCTACHGPQGISTNPEWPNLAGQHEKYFV
CCHHHEEEEECCCCEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
KQLKDIKEGKSRSAPTMTAIVANMNEQDMDDLAAYYAKMPVAEGSTPEKYLKRGEQLYRG
HHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
GDLNKHIAACIACHGPKGSGNAQAGFPLLSGQHAAYTIMQLQAFKDGKRTNDLNQIMQDI
CCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SSKMSPEDMEAVAYYIQGLY
HHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLALVLILCSSSVIFAQENPQEAGQNKSTVCTACHGPQGISTNPEWPNLAGQHEKYFV
CCHHHEEEEECCCCEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
KQLKDIKEGKSRSAPTMTAIVANMNEQDMDDLAAYYAKMPVAEGSTPEKYLKRGEQLYRG
HHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
GDLNKHIAACIACHGPKGSGNAQAGFPLLSGQHAAYTIMQLQAFKDGKRTNDLNQIMQDI
CCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SSKMSPEDMEAVAYYIQGLY
HHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]