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The map label for this gene is yuxH

Identifier: 52840368

GI number: 52840368

Start: 130773

End: 132017

Strand: Reverse

Name: yuxH

Synonym: lpg0113

Alternate gene names: 52840368

Gene position: 132017-130773 (Counterclockwise)

Preceding gene: 52840369

Following gene: 52840367

Centisome position: 3.89

GC content: 36.22

Gene sequence:

>1245_bases
ATGGTTGTAGAATTGGATGAGACACCAGTCAGAACGTTGCTAGCGCGTCAGGGAATCTATGATAAGAATAGCGCAATCGT
TGCCTATGAACTCTTGTATCGTAATAGTGATGCAGAAAACTCACACGTAGATAACCTAAACCAGTCGTCAGGTGAGGCAG
CTACCTCCTCTGTTCTAGTACAGTTATTTGCCAATCTTGATGTAAATACCATAATAGGTAATAAACAAGCTTTTATTAAT
TTCACTCATAGCCATCTTGTACAAAAAATCCCAATGTTGCTTCCTAAAAATAGAATAGTCATTGAAGTTCTTGAAACGGT
GGCGATCGACCAGCCATTGCTGCTCAATTTAATGGAATTAAAGAAGCAGGGATATCAAATTGCCCTGGATGATTTTGTCT
TCAGGAATGAATTGGCTCCTCTGGTTGATATGGCCGACATTATTAAAATCGATGTGCTTCATCTTGACCAGCAGCAAATC
GCAGAACAATTATTACCGCTGAAATCTTTTAGAGGTAAGTTATTGGCAGAAAAAATTGAGGACAAACAACAATTCAATCA
TTGCGTCAATCTTGGATTTGATTTTTTTCAAGGTTTTTTTCTAAACAAACCGGATTCCTTAACAGGACAAATCATTACTG
AAAATAAAATACAGCTTTTAAGATTATTAACAGAAATCAACAATGAAGAGGTACCAATCCAACGCATTGAAGAAATTATC
TTACAAATTCCCAAACTTAGCTATCGTATCTTGCGTTTGGCAAATTCTGCCTCTTTGTACATGAGCAAAAAAATAGAATC
ATTGATGGATGCCATTTCTCAATTGGGATTAATGCAAATACGCAACTGGTTAAATCTGTTACTCTTGGCAAGTCTCGATG
ATGTCGCACCTGATTTGTTGGAGCGAACATTAATTCGCGCCAAAATGTGTGAATCCTTAGCAAAATCAATGGATTATCCT
AACTCTCATCAAGCTTATACCGTAGGCATACTTTCTACTTTAGATGGTATTTTAAATGAGCCTATGCCTTCGCTATTAGC
AAAAATTCGGTTAAGTGAAACACTCAATGAAGCGCTACTGAACTACAAAGGGGATTTAGGCAAAATCCTGAAATTTGCTA
TAGATTATGAACAAGCAAATTTTAATCAATTAGAACGCATTCCTGTAAAAAGCGAAACGCTCTCTCAATCTTATCTTAAG
GGAATAGAATACGCCAATCATGTGATAGACATTATTAATAAATAA

Upstream 100 bases:

>100_bases
TTTATAACAATTCACAAGCTTCCGCATTCCAAGACTCTCAAGCATCGCATTATTAACTTTACAAAATAATGTTATAATCT
CATTCCAATGGATCAAATAA

Downstream 100 bases:

>100_bases
TTGTCGTCCCTATTAGTATTCATTCTGTATTCAACCTGTTTTACAAAAGAGAGTCTTTTGGAAATTGTCCGTATCAGATA
AGACAAAAAGGATTTTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MVVELDETPVRTLLARQGIYDKNSAIVAYELLYRNSDAENSHVDNLNQSSGEAATSSVLVQLFANLDVNTIIGNKQAFIN
FTHSHLVQKIPMLLPKNRIVIEVLETVAIDQPLLLNLMELKKQGYQIALDDFVFRNELAPLVDMADIIKIDVLHLDQQQI
AEQLLPLKSFRGKLLAEKIEDKQQFNHCVNLGFDFFQGFFLNKPDSLTGQIITENKIQLLRLLTEINNEEVPIQRIEEII
LQIPKLSYRILRLANSASLYMSKKIESLMDAISQLGLMQIRNWLNLLLLASLDDVAPDLLERTLIRAKMCESLAKSMDYP
NSHQAYTVGILSTLDGILNEPMPSLLAKIRLSETLNEALLNYKGDLGKILKFAIDYEQANFNQLERIPVKSETLSQSYLK
GIEYANHVIDIINK

Sequences:

>Translated_414_residues
MVVELDETPVRTLLARQGIYDKNSAIVAYELLYRNSDAENSHVDNLNQSSGEAATSSVLVQLFANLDVNTIIGNKQAFIN
FTHSHLVQKIPMLLPKNRIVIEVLETVAIDQPLLLNLMELKKQGYQIALDDFVFRNELAPLVDMADIIKIDVLHLDQQQI
AEQLLPLKSFRGKLLAEKIEDKQQFNHCVNLGFDFFQGFFLNKPDSLTGQIITENKIQLLRLLTEINNEEVPIQRIEEII
LQIPKLSYRILRLANSASLYMSKKIESLMDAISQLGLMQIRNWLNLLLLASLDDVAPDLLERTLIRAKMCESLAKSMDYP
NSHQAYTVGILSTLDGILNEPMPSLLAKIRLSETLNEALLNYKGDLGKILKFAIDYEQANFNQLERIPVKSETLSQSYLK
GIEYANHVIDIINK
>Mature_414_residues
MVVELDETPVRTLLARQGIYDKNSAIVAYELLYRNSDAENSHVDNLNQSSGEAATSSVLVQLFANLDVNTIIGNKQAFIN
FTHSHLVQKIPMLLPKNRIVIEVLETVAIDQPLLLNLMELKKQGYQIALDDFVFRNELAPLVDMADIIKIDVLHLDQQQI
AEQLLPLKSFRGKLLAEKIEDKQQFNHCVNLGFDFFQGFFLNKPDSLTGQIITENKIQLLRLLTEINNEEVPIQRIEEII
LQIPKLSYRILRLANSASLYMSKKIESLMDAISQLGLMQIRNWLNLLLLASLDDVAPDLLERTLIRAKMCESLAKSMDYP
NSHQAYTVGILSTLDGILNEPMPSLLAKIRLSETLNEALLNYKGDLGKILKFAIDYEQANFNQLERIPVKSETLSQSYLK
GIEYANHVIDIINK

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46972; Mature: 46972

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVELDETPVRTLLARQGIYDKNSAIVAYELLYRNSDAENSHVDNLNQSSGEAATSSVLV
CEEECCCCHHHHHHHHCCCCCCCCCEEEHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHH
QLFANLDVNTIIGNKQAFINFTHSHLVQKIPMLLPKNRIVIEVLETVAIDQPLLLNLMEL
HHHHCCCCEEEECCCHHEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
KKQGYQIALDDFVFRNELAPLVDMADIIKIDVLHLDQQQIAEQLLPLKSFRGKLLAEKIE
HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DKQQFNHCVNLGFDFFQGFFLNKPDSLTGQIITENKIQLLRLLTEINNEEVPIQRIEEII
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHH
LQIPKLSYRILRLANSASLYMSKKIESLMDAISQLGLMQIRNWLNLLLLASLDDVAPDLL
HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ERTLIRAKMCESLAKSMDYPNSHQAYTVGILSTLDGILNEPMPSLLAKIRLSETLNEALL
HHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
NYKGDLGKILKFAIDYEQANFNQLERIPVKSETLSQSYLKGIEYANHVIDIINK
HCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVVELDETPVRTLLARQGIYDKNSAIVAYELLYRNSDAENSHVDNLNQSSGEAATSSVLV
CEEECCCCHHHHHHHHCCCCCCCCCEEEHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHH
QLFANLDVNTIIGNKQAFINFTHSHLVQKIPMLLPKNRIVIEVLETVAIDQPLLLNLMEL
HHHHCCCCEEEECCCHHEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
KKQGYQIALDDFVFRNELAPLVDMADIIKIDVLHLDQQQIAEQLLPLKSFRGKLLAEKIE
HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DKQQFNHCVNLGFDFFQGFFLNKPDSLTGQIITENKIQLLRLLTEINNEEVPIQRIEEII
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHH
LQIPKLSYRILRLANSASLYMSKKIESLMDAISQLGLMQIRNWLNLLLLASLDDVAPDLL
HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ERTLIRAKMCESLAKSMDYPNSHQAYTVGILSTLDGILNEPMPSLLAKIRLSETLNEALL
HHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
NYKGDLGKILKFAIDYEQANFNQLERIPVKSETLSQSYLKGIEYANHVIDIINK
HCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]