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The map label for this gene is yxdM [H]

Identifier: 52787824

GI number: 52787824

Start: 3973455

End: 3975332

Strand: Direct

Name: yxdM [H]

Synonym: BLi04147

Alternate gene names: 52787824

Gene position: 3973455-3975332 (Clockwise)

Preceding gene: 52787823

Following gene: 52787825

Centisome position: 94.1

GC content: 43.88

Gene sequence:

>1878_bases
ATGACCTTTCTTCAGTTCGCTTATAAAAACGTCGTCCGGAATAAAAGAGCCTATCTCGCCTTCTTTTTAAGCAGCTCATT
TTCAGTGATGATTTTTTTCACATTTGCGATGTTTTTGTTCCACCCCGCTTTAGAGGAAGGCTACTTAAACACCATTGCAA
AACGGGGGTTGTCGGTGGCTGAATGGATGATTTTCGCCTTTTCCATTCTGTTTGTGCTTTATTCCGTCAACGCCTTTCTC
AAGTCGAGAAGCAAGGAATTCGGGATCCTCACCATCCAGGGAATCGCTCCGGGTCAATTGAGGAAGCTGATTACCGCAGA
AAACATCATCATCGGCGTGCTTTCGATCGTTACAGGCATCATCGGCGGTCTTGTTTTTGCAAAAACATTCTTTACGATCG
GCGCTTATATTCTGGAAATGGACGCTTTGCCATTGTATCTGCCTTGGAAAGCGATGGCCCTTACATCCGCCTGCTTTCTT
GCGCTGTTTATTCTGCTGTCGCAATTTACGGTGTTATTTATTAAATCAAAAACCGTTGTCAAGCTGATCAAAGGCACCGG
GAAAATTAAACCGGAGCCAAAACCGTCCATTATTTTTTCGGTCGTCGGCATCGGCTGCCTCGGCTCCGGCTACTGGCTTG
TATTGTTCGCCGACATCCATTTTCCCCAAGCCGTCACGATCTTAATTTTGACGATCATCGGGACTTATTTCTTCTTCAGC
CAAAGCAGCATTTGGCTGCTGCGGCTGTTAAAAAAGCGGAGGTCATTTTATTTACGAGGAAAAAACGTGCTTTGGATATC
CGATCTTGTTTATCGGCTGAAGGATAATGCCCGCCTGTTCTTTCTCGTTTGCATCATTTCCGCGGTCGCCTTTACCGCCA
TGGGTGCATTGGTAATTTCCAAGACTTCTATCGGAAAATTGGATTCCCGATATGAGATAGAGTACTTATTATACAGCGGG
AGCCAAAAGGAACAAACACACGTTAAGGTGATCGAACAAAAATTGAAGGACGGACATTTTTCGTATGCAAAGGAAGTGAC
AAAAGGAATTTATATGAGCTATAGCCAGGGAGATCTCCTTCCTCCGGTGCTCCTGGTCTCTGAAGGCGAATTCCAAAAGC
ACTTCAAGTTAAATTCCGGTGAACTGAAAGACGGTGAGGCGCTGTATTATCCAAACGCCTTTGAGGCAAAAGAAAAGCGG
GAAATTCCTGAGACCTTGGACATGTTGAACAAAGATTTGAAGCCGGCAAATGAACGGCTAAAGGTAAAAGGTATTAAAAA
ACCGCTCATTTCGTTAGAAAGCATCGTTGTCGTAAACGGCAAAACCTTCGAAAAGCTGAAAAAACAAGGCGAATCCCTCA
CATTGTACGGCTATCAGTACAACCGCTGGAAAGAGAGCCTCGACATGAGCCAATCATTGGAAAAAGATCTCAGAGAAAAA
TCTCACAATATCCAATTTCAATTTGAAGCAAAGGCCATCAATTATTTTGAAACTGTTCAGCTTCCAAGCCTGAGTCTGTT
TATCGGATTCTTTATTGCGGTTCTCTTTTTTACGGCATCCGGGAGCTTTCTGTACTTCCGCCTGTTTACCGATCTTGAAG
AAGATCAAGAGCGCTACCGGTCACTCTCAAAAATCGGCCTGAGCGAAAAGGAAATGTCGCAGAGCGTAACGATTCAATTG
GCCATCCTGTTCTTCTTTCCGTTCGTACTCGCCTCAATTCATACGTATTTTGCGATGAAGACGCTCGAGGCACAGAGCCT
TGGTCATTTCGCATCTCCGGTGATCATGACAATAGGCGGATTTCTGATCTTCCAACTATTATTCTTTATGATGATTCGAA
AAAGCTATCTGAAAAAATTAAAAGGATTTTTAAGGTGA

Upstream 100 bases:

>100_bases
AAAGACGGAACATTATTCAATGAAATTTACCGCGGCGCCAACCGCCAAGTATTTTATGAAGAGATTCTGAATGTGCTGTC
TATGCTGGGAGGAAATACCA

Downstream 100 bases:

>100_bases
TAAAATATGAAAAAAACAATTTCTCTCATTACAGCCGCTTTAGCTGTATGTATCGGCGCATTTCTGTTGATTCATAATGA
AGTGACAGACAGGTTCAATC

Product: YxdM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 624

Protein sequence:

>625_residues
MTFLQFAYKNVVRNKRAYLAFFLSSSFSVMIFFTFAMFLFHPALEEGYLNTIAKRGLSVAEWMIFAFSILFVLYSVNAFL
KSRSKEFGILTIQGIAPGQLRKLITAENIIIGVLSIVTGIIGGLVFAKTFFTIGAYILEMDALPLYLPWKAMALTSACFL
ALFILLSQFTVLFIKSKTVVKLIKGTGKIKPEPKPSIIFSVVGIGCLGSGYWLVLFADIHFPQAVTILILTIIGTYFFFS
QSSIWLLRLLKKRRSFYLRGKNVLWISDLVYRLKDNARLFFLVCIISAVAFTAMGALVISKTSIGKLDSRYEIEYLLYSG
SQKEQTHVKVIEQKLKDGHFSYAKEVTKGIYMSYSQGDLLPPVLLVSEGEFQKHFKLNSGELKDGEALYYPNAFEAKEKR
EIPETLDMLNKDLKPANERLKVKGIKKPLISLESIVVVNGKTFEKLKKQGESLTLYGYQYNRWKESLDMSQSLEKDLREK
SHNIQFQFEAKAINYFETVQLPSLSLFIGFFIAVLFFTASGSFLYFRLFTDLEEDQERYRSLSKIGLSEKEMSQSVTIQL
AILFFFPFVLASIHTYFAMKTLEAQSLGHFASPVIMTIGGFLIFQLLFFMMIRKSYLKKLKGFLR

Sequences:

>Translated_625_residues
MTFLQFAYKNVVRNKRAYLAFFLSSSFSVMIFFTFAMFLFHPALEEGYLNTIAKRGLSVAEWMIFAFSILFVLYSVNAFL
KSRSKEFGILTIQGIAPGQLRKLITAENIIIGVLSIVTGIIGGLVFAKTFFTIGAYILEMDALPLYLPWKAMALTSACFL
ALFILLSQFTVLFIKSKTVVKLIKGTGKIKPEPKPSIIFSVVGIGCLGSGYWLVLFADIHFPQAVTILILTIIGTYFFFS
QSSIWLLRLLKKRRSFYLRGKNVLWISDLVYRLKDNARLFFLVCIISAVAFTAMGALVISKTSIGKLDSRYEIEYLLYSG
SQKEQTHVKVIEQKLKDGHFSYAKEVTKGIYMSYSQGDLLPPVLLVSEGEFQKHFKLNSGELKDGEALYYPNAFEAKEKR
EIPETLDMLNKDLKPANERLKVKGIKKPLISLESIVVVNGKTFEKLKKQGESLTLYGYQYNRWKESLDMSQSLEKDLREK
SHNIQFQFEAKAINYFETVQLPSLSLFIGFFIAVLFFTASGSFLYFRLFTDLEEDQERYRSLSKIGLSEKEMSQSVTIQL
AILFFFPFVLASIHTYFAMKTLEAQSLGHFASPVIMTIGGFLIFQLLFFMMIRKSYLKKLKGFLR
>Mature_624_residues
TFLQFAYKNVVRNKRAYLAFFLSSSFSVMIFFTFAMFLFHPALEEGYLNTIAKRGLSVAEWMIFAFSILFVLYSVNAFLK
SRSKEFGILTIQGIAPGQLRKLITAENIIIGVLSIVTGIIGGLVFAKTFFTIGAYILEMDALPLYLPWKAMALTSACFLA
LFILLSQFTVLFIKSKTVVKLIKGTGKIKPEPKPSIIFSVVGIGCLGSGYWLVLFADIHFPQAVTILILTIIGTYFFFSQ
SSIWLLRLLKKRRSFYLRGKNVLWISDLVYRLKDNARLFFLVCIISAVAFTAMGALVISKTSIGKLDSRYEIEYLLYSGS
QKEQTHVKVIEQKLKDGHFSYAKEVTKGIYMSYSQGDLLPPVLLVSEGEFQKHFKLNSGELKDGEALYYPNAFEAKEKRE
IPETLDMLNKDLKPANERLKVKGIKKPLISLESIVVVNGKTFEKLKKQGESLTLYGYQYNRWKESLDMSQSLEKDLREKS
HNIQFQFEAKAINYFETVQLPSLSLFIGFFIAVLFFTASGSFLYFRLFTDLEEDQERYRSLSKIGLSEKEMSQSVTIQLA
ILFFFPFVLASIHTYFAMKTLEAQSLGHFASPVIMTIGGFLIFQLLFFMMIRKSYLKKLKGFLR

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 71307; Mature: 71176

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLQFAYKNVVRNKRAYLAFFLSSSFSVMIFFTFAMFLFHPALEEGYLNTIAKRGLSVA
CCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EWMIFAFSILFVLYSVNAFLKSRSKEFGILTIQGIAPGQLRKLITAENIIIGVLSIVTGI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IGGLVFAKTFFTIGAYILEMDALPLYLPWKAMALTSACFLALFILLSQFTVLFIKSKTVV
HHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHH
KLIKGTGKIKPEPKPSIIFSVVGIGCLGSGYWLVLFADIHFPQAVTILILTIIGTYFFFS
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHC
QSSIWLLRLLKKRRSFYLRGKNVLWISDLVYRLKDNARLFFLVCIISAVAFTAMGALVIS
CCHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEE
KTSIGKLDSRYEIEYLLYSGSQKEQTHVKVIEQKLKDGHFSYAKEVTKGIYMSYSQGDLL
CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCC
PPVLLVSEGEFQKHFKLNSGELKDGEALYYPNAFEAKEKREIPETLDMLNKDLKPANERL
CCEEEECCCCHHHHEECCCCCCCCCCEEECCCCCCCHHHHCCHHHHHHHCCCCCCCCCCE
KVKGIKKPLISLESIVVVNGKTFEKLKKQGESLTLYGYQYNRWKESLDMSQSLEKDLREK
EECCHHHHHHCCCCEEEECCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
SHNIQFQFEAKAINYFETVQLPSLSLFIGFFIAVLFFTASGSFLYFRLFTDLEEDQERYR
CCCEEEEEEECHHCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHCHHHHHHHHH
SLSKIGLSEKEMSQSVTIQLAILFFFPFVLASIHTYFAMKTLEAQSLGHFASPVIMTIGG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FLIFQLLFFMMIRKSYLKKLKGFLR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFLQFAYKNVVRNKRAYLAFFLSSSFSVMIFFTFAMFLFHPALEEGYLNTIAKRGLSVA
CHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EWMIFAFSILFVLYSVNAFLKSRSKEFGILTIQGIAPGQLRKLITAENIIIGVLSIVTGI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IGGLVFAKTFFTIGAYILEMDALPLYLPWKAMALTSACFLALFILLSQFTVLFIKSKTVV
HHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHH
KLIKGTGKIKPEPKPSIIFSVVGIGCLGSGYWLVLFADIHFPQAVTILILTIIGTYFFFS
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHC
QSSIWLLRLLKKRRSFYLRGKNVLWISDLVYRLKDNARLFFLVCIISAVAFTAMGALVIS
CCHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEE
KTSIGKLDSRYEIEYLLYSGSQKEQTHVKVIEQKLKDGHFSYAKEVTKGIYMSYSQGDLL
CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCC
PPVLLVSEGEFQKHFKLNSGELKDGEALYYPNAFEAKEKREIPETLDMLNKDLKPANERL
CCEEEECCCCHHHHEECCCCCCCCCCEEECCCCCCCHHHHCCHHHHHHHCCCCCCCCCCE
KVKGIKKPLISLESIVVVNGKTFEKLKKQGESLTLYGYQYNRWKESLDMSQSLEKDLREK
EECCHHHHHHCCCCEEEECCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
SHNIQFQFEAKAINYFETVQLPSLSLFIGFFIAVLFFTASGSFLYFRLFTDLEEDQERYR
CCCEEEEEEECHHCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHCHHHHHHHHH
SLSKIGLSEKEMSQSVTIQLAILFFFPFVLASIHTYFAMKTLEAQSLGHFASPVIMTIGG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FLIFQLLFFMMIRKSYLKKLKGFLR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]