| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is vpr [H]
Identifier: 52787696
GI number: 52787696
Start: 3843061
End: 3845469
Strand: Direct
Name: vpr [H]
Synonym: BLi04019
Alternate gene names: 52787696
Gene position: 3843061-3845469 (Clockwise)
Preceding gene: 52787691
Following gene: 52787697
Centisome position: 91.01
GC content: 49.44
Gene sequence:
>2409_bases TTGAGAAAAAGTATCGTGCGCTATTTTGTTATGGCTTTTATTCTATTATTTGCGTTATCCACATTCCTCACCGGAGTGCA GGCAACTTCCGTTCCCGATAAAAAGTCGCCTGAGCTTGAGAAAGCTGAAATCTACGGTGATATTGATGTGACGTCTGATA AACAGACGACGGTTATCGTGGAACTGAAAGAAAAGTCGCTTGCCGAAGCAAAAGCGGACGGAGAAAAACAAACGAAGGCT TCTCTAAAAACAGCTCGAAGCAAAGCGCTGAAAACACTTAAAAAAGCGAAAGTAAACCGCGAATACGACCGTGTATTTTC GGGCTTTTCTATGAAACTGCCGGCCAGTGAAATTCCAAAGCTGCTCGCCGTCAAGGAAGTTAAAGCGGTTTATCCAAACG CAACTTACAAACCTGACAGCGTAAAAGGAAAAGACGTGACACTTGCAGCAGACGCCATTTATCCACAGATGGATAAAAGT GCCCCGTTCATCGGAGCGGATCAGGCATGGAAATCGGGCTATACCGGTAAAGGCATTAAGGTAGCCGTTATTGATACGGG CGTGGATTACACCCATCCCGACTTAAAGAATAATTTCGGCCCATATAAGGGCTATGACTTTGTGGATAATGATTATGATC CACAGGAAACACCGACAGGCGACCCGCGCGGCGGAGCGACTGATCACGGCACTCATGTTGCAGGAACAATCGCCGCGAAC GGACAGATTAAAGGCGTGGCGCCTGAAGCAACGCTTCTTGCTTACCGCGTGCTCGGCCCCGGCGGCTCAGGCACAACCGA GAATGTGATTGCGGGCATTGAAAAAGCCGTTGCAGACGGAGCAAAAGTGATGAACCTCTCATTGGGAAATTCGCTGAACA GCCCTGATTATGCAACAAGCATCGCACTGGACTGGGCGATGGCTGAAGGGGTTGTCGCCGTTACGTCAAACGGTAACAGC GGACCGGAAAACTGGACGGTCGGCTCGCCGGGAACATCAAGGGTTGCGATTTCCGTCGGCGCATCACAGCTTCCGTATAA TGAGTATTCGGTGACGCTTCCTTCGTATTCATCAGCAAAGGTGATGGGATACCAAGAGGAAAAGGATCTTGAAGCATTGA ACGGTCAAGAGGTGGAACTCGTTGAAGCCGGCCTCGGACAAGCTGACGATTTCTCAGGCAAAGATGTGAAAGGAAAAGTT GCGGTTATCCAGAGAGGCGTCATACCATTTGTTGATAAGGCTGAAAATGCCAAAAACGCCGGCGCTATCGGAGCCGTGAT TTACAATAATGCAACAGGGGAAATCGAGGCAAACGTCATGGGGATGGCCGTACCGACCGTCAAATTGTCAAAAGAAGAGG GCGAAAAGCTTGTTCAACAGATCAAAGAAGGGAAACACTCCGTTGTCTTTTCTTTCAAATTGGACAAAAAGCTGGGGGAA ACAATTGCCTCATTCTCGTCCCGCGGGCCTGTCATGGATACATGGATGATTAAACCTGACGTTTCAGCGCCAGGCGTCAA CATCGTCAGCACCATTCCGACCCACGATCCGAAAAACCCGTACGGTTACGGTTCAAAACAGGGAACAAGCATGGCTTCCC CGCATGTCGCGGGAACGGCAGCCATATTAAAGCAGGCCAAACCGGATTGGACGCCTGAGCAAATCAAAGGCGTACTGATG AATACGGCGGAAAAACTGACGGATGAAAATGGAAAGCCTCTCCCTCACAATACGCAAGGAGCGGGCAGCATCCGCATCAT GGAGGCCCTTAAAGCTTCATCCATTGTAACGCCGGGCAGCCATTCATACGGAACATTCCTGAAAGACAAAGGGAAACAGA CGAAAAAACAAGCGTTCACGATTGAAAACCTTTCTTCACACAGAAAAGCCTATCAGCTCGAATACTCCTTTAAAGGAACG GGCATCACGGTATCAGGAACGGAACGAGTCGTGGTACCGGCCAATCAAACAGGTAAAGCAGCGGCAAAAGTAACCGTCAA TTCCGCGAAAACGAAAGCAGGCACATATGAAGGCACGGTTTACATCCGTGAAGACGGAAGAAAAGTCGCCGAAATCCCGC TCCTATTGATCGTCAAAGAGCCAGACTACCCGCGCGTCACATCCGTAACAGTTGAACCGGGAGCAAAGCAGGGCGCTTAC ACGATCGAAGCCTACCTGCCGGGCGGGGCTGAAGAGCTCGCATTTCTCGTCTATGATGAAAACCTGAACCTTCTCGGCCA GGCCGGCGTTTACAAAAACCAGGGCAAAGGCTATCAATCTTATCAATGGAACGGCAAAATCAATGACGCCGCATCCCTTA AGTCCGGAAAATACTATATGCTTGCCTATGCATCCGCCAAAGGGAAATCAAGCTACGTATTGACGGAAGACCCTTTTATC GTCGAATAA
Upstream 100 bases:
>100_bases TCTATATATAGAAGGATTTTTTTGAAACTGAGAGAATATTTTAAAAGTTCGAAACTCTAATAATTACAAAGAAACATTTA TCCAGAAGGGGGAAAACAGA
Downstream 100 bases:
>100_bases TGACAAGCCTTGTTGAGAACCACTCAACAAGGCTTTTTTATGTTAAAATACGGATAATGCGTTCAGGAGAAGCTCCCCCT TCTCTTCAAAACGTGAAAAA
Product: Vpr
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MRKSIVRYFVMAFILLFALSTFLTGVQATSVPDKKSPELEKAEIYGDIDVTSDKQTTVIVELKEKSLAEAKADGEKQTKA SLKTARSKALKTLKKAKVNREYDRVFSGFSMKLPASEIPKLLAVKEVKAVYPNATYKPDSVKGKDVTLAADAIYPQMDKS APFIGADQAWKSGYTGKGIKVAVIDTGVDYTHPDLKNNFGPYKGYDFVDNDYDPQETPTGDPRGGATDHGTHVAGTIAAN GQIKGVAPEATLLAYRVLGPGGSGTTENVIAGIEKAVADGAKVMNLSLGNSLNSPDYATSIALDWAMAEGVVAVTSNGNS GPENWTVGSPGTSRVAISVGASQLPYNEYSVTLPSYSSAKVMGYQEEKDLEALNGQEVELVEAGLGQADDFSGKDVKGKV AVIQRGVIPFVDKAENAKNAGAIGAVIYNNATGEIEANVMGMAVPTVKLSKEEGEKLVQQIKEGKHSVVFSFKLDKKLGE TIASFSSRGPVMDTWMIKPDVSAPGVNIVSTIPTHDPKNPYGYGSKQGTSMASPHVAGTAAILKQAKPDWTPEQIKGVLM NTAEKLTDENGKPLPHNTQGAGSIRIMEALKASSIVTPGSHSYGTFLKDKGKQTKKQAFTIENLSSHRKAYQLEYSFKGT GITVSGTERVVVPANQTGKAAAKVTVNSAKTKAGTYEGTVYIREDGRKVAEIPLLLIVKEPDYPRVTSVTVEPGAKQGAY TIEAYLPGGAEELAFLVYDENLNLLGQAGVYKNQGKGYQSYQWNGKINDAASLKSGKYYMLAYASAKGKSSYVLTEDPFI VE
Sequences:
>Translated_802_residues MRKSIVRYFVMAFILLFALSTFLTGVQATSVPDKKSPELEKAEIYGDIDVTSDKQTTVIVELKEKSLAEAKADGEKQTKA SLKTARSKALKTLKKAKVNREYDRVFSGFSMKLPASEIPKLLAVKEVKAVYPNATYKPDSVKGKDVTLAADAIYPQMDKS APFIGADQAWKSGYTGKGIKVAVIDTGVDYTHPDLKNNFGPYKGYDFVDNDYDPQETPTGDPRGGATDHGTHVAGTIAAN GQIKGVAPEATLLAYRVLGPGGSGTTENVIAGIEKAVADGAKVMNLSLGNSLNSPDYATSIALDWAMAEGVVAVTSNGNS GPENWTVGSPGTSRVAISVGASQLPYNEYSVTLPSYSSAKVMGYQEEKDLEALNGQEVELVEAGLGQADDFSGKDVKGKV AVIQRGVIPFVDKAENAKNAGAIGAVIYNNATGEIEANVMGMAVPTVKLSKEEGEKLVQQIKEGKHSVVFSFKLDKKLGE TIASFSSRGPVMDTWMIKPDVSAPGVNIVSTIPTHDPKNPYGYGSKQGTSMASPHVAGTAAILKQAKPDWTPEQIKGVLM NTAEKLTDENGKPLPHNTQGAGSIRIMEALKASSIVTPGSHSYGTFLKDKGKQTKKQAFTIENLSSHRKAYQLEYSFKGT GITVSGTERVVVPANQTGKAAAKVTVNSAKTKAGTYEGTVYIREDGRKVAEIPLLLIVKEPDYPRVTSVTVEPGAKQGAY TIEAYLPGGAEELAFLVYDENLNLLGQAGVYKNQGKGYQSYQWNGKINDAASLKSGKYYMLAYASAKGKSSYVLTEDPFI VE >Mature_802_residues MRKSIVRYFVMAFILLFALSTFLTGVQATSVPDKKSPELEKAEIYGDIDVTSDKQTTVIVELKEKSLAEAKADGEKQTKA SLKTARSKALKTLKKAKVNREYDRVFSGFSMKLPASEIPKLLAVKEVKAVYPNATYKPDSVKGKDVTLAADAIYPQMDKS APFIGADQAWKSGYTGKGIKVAVIDTGVDYTHPDLKNNFGPYKGYDFVDNDYDPQETPTGDPRGGATDHGTHVAGTIAAN GQIKGVAPEATLLAYRVLGPGGSGTTENVIAGIEKAVADGAKVMNLSLGNSLNSPDYATSIALDWAMAEGVVAVTSNGNS GPENWTVGSPGTSRVAISVGASQLPYNEYSVTLPSYSSAKVMGYQEEKDLEALNGQEVELVEAGLGQADDFSGKDVKGKV AVIQRGVIPFVDKAENAKNAGAIGAVIYNNATGEIEANVMGMAVPTVKLSKEEGEKLVQQIKEGKHSVVFSFKLDKKLGE TIASFSSRGPVMDTWMIKPDVSAPGVNIVSTIPTHDPKNPYGYGSKQGTSMASPHVAGTAAILKQAKPDWTPEQIKGVLM NTAEKLTDENGKPLPHNTQGAGSIRIMEALKASSIVTPGSHSYGTFLKDKGKQTKKQAFTIENLSSHRKAYQLEYSFKGT GITVSGTERVVVPANQTGKAAAKVTVNSAKTKAGTYEGTVYIREDGRKVAEIPLLLIVKEPDYPRVTSVTVEPGAKQGAY TIEAYLPGGAEELAFLVYDENLNLLGQAGVYKNQGKGYQSYQWNGKINDAASLKSGKYYMLAYASAKGKSSYVLTEDPFI VE
Specific function: Not required for growth or sporulation [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4506775, Length=180, Percent_Identity=32.7777777777778, Blast_Score=80, Evalue=9e-15, Organism=Homo sapiens, GI4505577, Length=97, Percent_Identity=41.2371134020619, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI20336180, Length=97, Percent_Identity=41.2371134020619, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI20336182, Length=97, Percent_Identity=41.2371134020619, Blast_Score=72, Evalue=3e-12, Organism=Homo sapiens, GI27894285, Length=97, Percent_Identity=41.2371134020619, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI20336190, Length=97, Percent_Identity=41.2371134020619, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI20336184, Length=97, Percent_Identity=41.2371134020619, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI20336188, Length=97, Percent_Identity=41.2371134020619, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI76443679, Length=118, Percent_Identity=40.6779661016949, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI20336186, Length=97, Percent_Identity=41.2371134020619, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI20336244, Length=81, Percent_Identity=44.4444444444444, Blast_Score=70, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71987206, Length=99, Percent_Identity=42.4242424242424, Blast_Score=70, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319893, Length=244, Percent_Identity=29.5081967213115, Blast_Score=74, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6320775, Length=181, Percent_Identity=33.1491712707182, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550681, Length=184, Percent_Identity=29.8913043478261, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI281360987, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24642488, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24642484, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24642486, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24642494, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24642490, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI45555723, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24642492, Length=94, Percent_Identity=40.4255319148936, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI281360985, Length=94, Percent_Identity=40.4255319148936, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR010259 - InterPro: IPR003137 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF02225 PA; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 85627; Mature: 85627
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSIVRYFVMAFILLFALSTFLTGVQATSVPDKKSPELEKAEIYGDIDVTSDKQTTVIV CCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEECEEECCCCCEEEEE ELKEKSLAEAKADGEKQTKASLKTARSKALKTLKKAKVNREYDRVFSGFSMKLPASEIPK EECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCHHHCCH LLAVKEVKAVYPNATYKPDSVKGKDVTLAADAIYPQMDKSAPFIGADQAWKSGYTGKGIK HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHCCCCCCCEE VAVIDTGVDYTHPDLKNNFGPYKGYDFVDNDYDPQETPTGDPRGGATDHGTHVAGTIAAN EEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC GQIKGVAPEATLLAYRVLGPGGSGTTENVIAGIEKAVADGAKVMNLSLGNSLNSPDYATS CEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEE IALDWAMAEGVVAVTSNGNSGPENWTVGSPGTSRVAISVGASQLPYNEYSVTLPSYSSAK EEEEEHHHCCEEEEECCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCE VMGYQEEKDLEALNGQEVELVEAGLGQADDFSGKDVKGKVAVIQRGVIPFVDKAENAKNA EECCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC GAIGAVIYNNATGEIEANVMGMAVPTVKLSKEEGEKLVQQIKEGKHSVVFSFKLDKKLGE CCEEEEEEECCCCEEEEEEEEEEECEEEECHHHHHHHHHHHHCCCCEEEEEEEECHHHHH TIASFSSRGPVMDTWMIKPDVSAPGVNIVSTIPTHDPKNPYGYGSKQGTSMASPHVAGTA HHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH AILKQAKPDWTPEQIKGVLMNTAEKLTDENGKPLPHNTQGAGSIRIMEALKASSIVTPGS HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCC HSYGTFLKDKGKQTKKQAFTIENLSSHRKAYQLEYSFKGTGITVSGTERVVVPANQTGKA CCCCCHHHHCCCHHHHHHEEHHHHHCCCEEEEEEEEECCCCEEECCCCEEEECCCCCCCE AAKVTVNSAKTKAGTYEGTVYIREDGRKVAEIPLLLIVKEPDYPRVTSVTVEPGAKQGAY EEEEEECCCCCCCCCEEEEEEEECCCCEEEECCEEEEEECCCCCCEEEEEECCCCCCCCE TIEAYLPGGAEELAFLVYDENLNLLGQAGVYKNQGKGYQSYQWNGKINDAASLKSGKYYM EEEEECCCCHHHEEEEEEECCCCEEECCCCCCCCCCCCCEEECCCCCCCHHHCCCCCEEE LAYASAKGKSSYVLTEDPFIVE EEEEECCCCCCEEEECCCEEEC >Mature Secondary Structure MRKSIVRYFVMAFILLFALSTFLTGVQATSVPDKKSPELEKAEIYGDIDVTSDKQTTVIV CCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEECEEECCCCCEEEEE ELKEKSLAEAKADGEKQTKASLKTARSKALKTLKKAKVNREYDRVFSGFSMKLPASEIPK EECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCHHHCCH LLAVKEVKAVYPNATYKPDSVKGKDVTLAADAIYPQMDKSAPFIGADQAWKSGYTGKGIK HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHCCCCCCCEE VAVIDTGVDYTHPDLKNNFGPYKGYDFVDNDYDPQETPTGDPRGGATDHGTHVAGTIAAN EEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC GQIKGVAPEATLLAYRVLGPGGSGTTENVIAGIEKAVADGAKVMNLSLGNSLNSPDYATS CEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEE IALDWAMAEGVVAVTSNGNSGPENWTVGSPGTSRVAISVGASQLPYNEYSVTLPSYSSAK EEEEEHHHCCEEEEECCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCE VMGYQEEKDLEALNGQEVELVEAGLGQADDFSGKDVKGKVAVIQRGVIPFVDKAENAKNA EECCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC GAIGAVIYNNATGEIEANVMGMAVPTVKLSKEEGEKLVQQIKEGKHSVVFSFKLDKKLGE CCEEEEEEECCCCEEEEEEEEEEECEEEECHHHHHHHHHHHHCCCCEEEEEEEECHHHHH TIASFSSRGPVMDTWMIKPDVSAPGVNIVSTIPTHDPKNPYGYGSKQGTSMASPHVAGTA HHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH AILKQAKPDWTPEQIKGVLMNTAEKLTDENGKPLPHNTQGAGSIRIMEALKASSIVTPGS HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCC HSYGTFLKDKGKQTKKQAFTIENLSSHRKAYQLEYSFKGTGITVSGTERVVVPANQTGKA CCCCCHHHHCCCHHHHHHEEHHHHHCCCEEEEEEEEECCCCEEECCCCEEEECCCCCCCE AAKVTVNSAKTKAGTYEGTVYIREDGRKVAEIPLLLIVKEPDYPRVTSVTVEPGAKQGAY EEEEEECCCCCCCCCEEEEEEEECCCCEEEECCEEEEEECCCCCCEEEEEECCCCCCCCE TIEAYLPGGAEELAFLVYDENLNLLGQAGVYKNQGKGYQSYQWNGKINDAASLKSGKYYM EEEEECCCCHHHEEEEEEECCCCEEECCCCCCCCCCCCCEEECCCCCCCHHHCCCCCEEE LAYASAKGKSSYVLTEDPFIVE EEEEECCCCCCEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1938892; 7934828; 9384377; 10658653 [H]