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The map label for this gene is atpB [H]

Identifier: 52787610

GI number: 52787610

Start: 3757813

End: 3758547

Strand: Reverse

Name: atpB [H]

Synonym: BLi03932

Alternate gene names: 52787610

Gene position: 3758547-3757813 (Counterclockwise)

Preceding gene: 52787611

Following gene: 52787609

Centisome position: 89.01

GC content: 45.03

Gene sequence:

>735_bases
TTGAATCACGAATCTAGAATTGTTAATTTCTTAGGCCTCAATTTTGATTTAACTAGCATTCTAATGATTACTGTGACAAG
CATCATCGTCTTTCTGATAGCGGTGCTGACCACAAGAACACTCGCGATCCGGCCGACGAAAGCTCAGAACTTTATGGAGT
GGATTGTCGACTTTGTTCGCAATATTATCGGCAGCACAATGGATCTTAAAGTCGGCAGAGACTTTCTCGCCCTTGGCATA
ACCCTGCTGATGTACATATTTGTTGCCAACATGCTCGGCCTTCCGTTTTCCATAACAGTAGGCCACGAATTATGGTGGAA
ATCCCCTACGGCCGATCCGGCGGTTACTTTAACCCTCGCCGTCATGGTAGTAGGCCTCACTCATTACTACGGAGTGAAAA
GGAAAGGGTTGGGGGAGTATACCAAAGATTTCTTCAGACCAATTCCATATTTAGTGCCGCTCAAAATCATTGAAGAATTT
GCGAACACATTAACATTGGGATTGCGTCTTTACGGTAATATTTTCGCCGGCGAAATTCTGCTCGGCCTTCTTGCCGGACT
GGCAACCAACTTCTATTCTCAAAGCATTTTCCTGGGGCTGGTTGGAACCATTGGAGCGGTTGTGCCGATGATCGTATGGC
AGGCGTTCAGCTTGTTCGTAGGTACAATCCAGGCATTCATCTTCACGATGTTAACAATGGTTTACATGTCTCACAAAGTA
AGTCATGAACACTAA

Upstream 100 bases:

>100_bases
GCAGGCGTCATTGTGGGGTTGATGACAATTTATCCTGTCATTATGATAGATTCCTTTATCCAGCTAAAACGTTCATCAAT
GGAAGAGAGGTGAAAACCCT

Downstream 100 bases:

>100_bases
AAATAAGACATATCCGCTAAGGATAACAATTTAAAGGAGGAACTTTTTCATGAGTTTAATAGCAGCTGCAATCGCAATTG
GATTAGGTGCACTTGGTGCA

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNHESRIVNFLGLNFDLTSILMITVTSIIVFLIAVLTTRTLAIRPTKAQNFMEWIVDFVRNIIGSTMDLKVGRDFLALGI
TLLMYIFVANMLGLPFSITVGHELWWKSPTADPAVTLTLAVMVVGLTHYYGVKRKGLGEYTKDFFRPIPYLVPLKIIEEF
ANTLTLGLRLYGNIFAGEILLGLLAGLATNFYSQSIFLGLVGTIGAVVPMIVWQAFSLFVGTIQAFIFTMLTMVYMSHKV
SHEH

Sequences:

>Translated_244_residues
MNHESRIVNFLGLNFDLTSILMITVTSIIVFLIAVLTTRTLAIRPTKAQNFMEWIVDFVRNIIGSTMDLKVGRDFLALGI
TLLMYIFVANMLGLPFSITVGHELWWKSPTADPAVTLTLAVMVVGLTHYYGVKRKGLGEYTKDFFRPIPYLVPLKIIEEF
ANTLTLGLRLYGNIFAGEILLGLLAGLATNFYSQSIFLGLVGTIGAVVPMIVWQAFSLFVGTIQAFIFTMLTMVYMSHKV
SHEH
>Mature_244_residues
MNHESRIVNFLGLNFDLTSILMITVTSIIVFLIAVLTTRTLAIRPTKAQNFMEWIVDFVRNIIGSTMDLKVGRDFLALGI
TLLMYIFVANMLGLPFSITVGHELWWKSPTADPAVTLTLAVMVVGLTHYYGVKRKGLGEYTKDFFRPIPYLVPLKIIEEF
ANTLTLGLRLYGNIFAGEILLGLLAGLATNFYSQSIFLGLVGTIGAVVPMIVWQAFSLFVGTIQAFIFTMLTMVYMSHKV
SHEH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

Organism=Escherichia coli, GI1790176, Length=217, Percent_Identity=33.1797235023041, Blast_Score=87, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 27262; Mature: 27262

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA