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The map label for this gene is atpC

Identifier: 52787603

GI number: 52787603

Start: 3751982

End: 3752377

Strand: Reverse

Name: atpC

Synonym: BLi03925

Alternate gene names: 52787603

Gene position: 3752377-3751982 (Counterclockwise)

Preceding gene: 52787604

Following gene: 52787602

Centisome position: 88.86

GC content: 50.51

Gene sequence:

>396_bases
ATGAAGACCTTAAAAGTCAATATCGTTACTCCCGACGGCCCAGTATACGATGCGGATATAGAAATGGTAAGCGTTAGAGC
AGAGAGCGGTGAGCTTGGTATTTTACCCGGCCATATTCCGACGGTTGCTCCGCTAAAAATTGCTGCAGTCCGTCTGAAAA
AAGACGGTCAAACTGAGCTGGTTGCCGTCAGCGGGGGGATAGTGGAAGTCCGCCCTGACCATGTCACCATTCTGGCCCAG
ACGGCGGAAACATCTGAACAAATTGACAAAGAACGCGCCTTGGCCGCAAAACGGCGTGCCGAGGAACGTTTGCAAAAGCA
AACTCCAGATGTTGACATTATTCGGGCAGAGCTTGCTTTAAAACGCGCGATTAACCGGTTGGATGTTGCGAGATAG

Upstream 100 bases:

>100_bases
CTGAGGACGCTTTCCGCCTTGTCGGCCGAATCGAAGAAGTTGTCGAAAAAGCGAAAGAAATGGGTGTAGAAGTATAATCT
GGTCCTAGGAGGGTAAAAGC

Downstream 100 bases:

>100_bases
AGATAAGGATCCTTCCCATATTTAAGGATGGGAAGGGTCTTTTATATTCAAGATCAAACAGAATTGAAAATGTTGAAAAA
TGTTCACAAATTGTTCGCCT

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKTLKVNIVTPDGPVYDADIEMVSVRAESGELGILPGHIPTVAPLKIAAVRLKKDGQTELVAVSGGIVEVRPDHVTILAQ
TAETSEQIDKERALAAKRRAEERLQKQTPDVDIIRAELALKRAINRLDVAR

Sequences:

>Translated_131_residues
MKTLKVNIVTPDGPVYDADIEMVSVRAESGELGILPGHIPTVAPLKIAAVRLKKDGQTELVAVSGGIVEVRPDHVTILAQ
TAETSEQIDKERALAAKRRAEERLQKQTPDVDIIRAELALKRAINRLDVAR
>Mature_131_residues
MKTLKVNIVTPDGPVYDADIEMVSVRAESGELGILPGHIPTVAPLKIAAVRLKKDGQTELVAVSGGIVEVRPDHVTILAQ
TAETSEQIDKERALAAKRRAEERLQKQTPDVDIIRAELALKRAINRLDVAR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=128, Percent_Identity=38.28125, Blast_Score=97, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_BACLD (Q65DX5)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_081003.1
- RefSeq:   YP_093432.1
- HSSP:   P0A6E6
- ProteinModelPortal:   Q65DX5
- SMR:   Q65DX5
- STRING:   Q65DX5
- EnsemblBacteria:   EBBACT00000056322
- EnsemblBacteria:   EBBACT00000060120
- GeneID:   3028344
- GeneID:   3101243
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi03925
- KEGG:   bli:BL04001
- NMPDR:   fig|279010.5.peg.4010
- eggNOG:   COG0355
- GeneTree:   EBGT00050000001943
- HOGENOM:   HBG663981
- OMA:   EMVSVRA
- ProtClustDB:   PRK00571
- BioCyc:   BLIC279010-1:BLI03925-MONOMER
- BioCyc:   BLIC279010:BL04001-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14279; Mature: 14279

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLKVNIVTPDGPVYDADIEMVSVRAESGELGILPGHIPTVAPLKIAAVRLKKDGQTEL
CCEEEEEEECCCCCEEECCEEEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCCCCEEE
VAVSGGIVEVRPDHVTILAQTAETSEQIDKERALAAKRRAEERLQKQTPDVDIIRAELAL
EEEECCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH
KRAINRLDVAR
HHHHHHHCCCC
>Mature Secondary Structure
MKTLKVNIVTPDGPVYDADIEMVSVRAESGELGILPGHIPTVAPLKIAAVRLKKDGQTEL
CCEEEEEEECCCCCEEECCEEEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCCCCEEE
VAVSGGIVEVRPDHVTILAQTAETSEQIDKERALAAKRRAEERLQKQTPDVDIIRAELAL
EEEECCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH
KRAINRLDVAR
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA