Click here to switch to the map view.

The map label for this gene is ywnA [H]

Identifier: 52787590

GI number: 52787590

Start: 3738451

End: 3738852

Strand: Reverse

Name: ywnA [H]

Synonym: BLi03912

Alternate gene names: 52787590

Gene position: 3738852-3738451 (Counterclockwise)

Preceding gene: 52787592

Following gene: 52787589

Centisome position: 88.54

GC content: 48.76

Gene sequence:

>402_bases
ATGGTGAACACCCGTCTTTCAGTGGCCATTCATATATTGTCTTTAATCGCCGCAAACCCGCGGGAATCTTCGGAAATGAT
CGCCGGGAGCGTTAATACGAACCCGGTTGTAATCAGGCGCATGATCAGCCAGCTCAAAAAAGCCGGTATTCTGACGTCGC
GGCCGGGAGTGGCCGGGGCAAGCCTGAAAAGAGATCCCGAAGATATATCTCTGCTTGATATTTACCGCGCGGTTCAGCCG
CATGAGGAATTATTTGCGATTCATGACAAGCCGAATCCAAACTGTCCGGTTGGAAGACAAATTCAAACAACGCTTGATCA
AACGTTTCACAGCGTTCAGCAGGCGATGGAGAACGAATTGGCCAGCAAGTCTCTTAAAGACGTCTTAACTCATCTCTTTT
AA

Upstream 100 bases:

>100_bases
TGAAAAAATTTTTATTTATTCTTGCGATCATTAAGGATATGATAAGAGTTGACAAAAACGTGACCTGTAACTATAATAAT
TACATCGGTGGTGAAAACAT

Downstream 100 bases:

>100_bases
ACAAGAGATGATGTTTCATCATCAACATGTAACAAATCTTGTTACAAATAATCAAATTATTGGAGGAAGCGATTATGAAA
ATCGGTATTATCGGTGCAAG

Product: YwnA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MVNTRLSVAIHILSLIAANPRESSEMIAGSVNTNPVVIRRMISQLKKAGILTSRPGVAGASLKRDPEDISLLDIYRAVQP
HEELFAIHDKPNPNCPVGRQIQTTLDQTFHSVQQAMENELASKSLKDVLTHLF

Sequences:

>Translated_133_residues
MVNTRLSVAIHILSLIAANPRESSEMIAGSVNTNPVVIRRMISQLKKAGILTSRPGVAGASLKRDPEDISLLDIYRAVQP
HEELFAIHDKPNPNCPVGRQIQTTLDQTFHSVQQAMENELASKSLKDVLTHLF
>Mature_133_residues
MVNTRLSVAIHILSLIAANPRESSEMIAGSVNTNPVVIRRMISQLKKAGILTSRPGVAGASLKRDPEDISLLDIYRAVQP
HEELFAIHDKPNPNCPVGRQIQTTLDQTFHSVQQAMENELASKSLKDVLTHLF

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 14662; Mature: 14662

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNTRLSVAIHILSLIAANPRESSEMIAGSVNTNPVVIRRMISQLKKAGILTSRPGVAGA
CCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SLKRDPEDISLLDIYRAVQPHEELFAIHDKPNPNCPVGRQIQTTLDQTFHSVQQAMENEL
CCCCCCCHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASKSLKDVLTHLF
HHHHHHHHHHHHC
>Mature Secondary Structure
MVNTRLSVAIHILSLIAANPRESSEMIAGSVNTNPVVIRRMISQLKKAGILTSRPGVAGA
CCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SLKRDPEDISLLDIYRAVQPHEELFAIHDKPNPNCPVGRQIQTTLDQTFHSVQQAMENEL
CCCCCCCHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASKSLKDVLTHLF
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]