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The map label for this gene is cggR [H]

Identifier: 52787351

GI number: 52787351

Start: 3492375

End: 3493415

Strand: Reverse

Name: cggR [H]

Synonym: BLi03666

Alternate gene names: 52787351

Gene position: 3493415-3492375 (Counterclockwise)

Preceding gene: 52787352

Following gene: 52787350

Centisome position: 82.73

GC content: 46.01

Gene sequence:

>1041_bases
ATGAATCAACTAATACAGGCTCAGAAAAAATTATTGCCGGATCTTCTCGATGTCATGCAGAAAAGGTACAAAATTTTGCA
GTACATAAGGCTGACTGAACCGATCGGCAGAAGAAGCCTTGCTGCCAGCCTCGGCATCAGCGAGCGGATTTTAAGGGCGG
AGGTTCAGTTTTTAAAAGAACAAAATCTACTAGAGATTAAAACAACCGGCATGATATTGACACCTGAAGGATCCGACCTG
CTGAAAGTTCTCGAAGATACGATGAAGGACGTTTTAGGTTTAACTCATTTGGAAAATACATTAAAAGAGAGGTTGAACCT
CGACGAAGTCATCATTGTATCGGGAGACAGCGACCAGTCCCCATGGGTCAAAAAAGAGATGGGGAGAGCGGCCGTCGCAT
GCATGAAAAATAGGTTTACGGGGGAAAATATCGTCGCCGTAACCGGAGGTACGACACTTGAGGCCGTGGCAGAAATGATG
ACGCCTGACTCGAAAAACCGCAAGCTGCTTTTTGTTCCGGCAAGAGGCGGACTGGGCGAAAACGTCAGGAATCAGGCCAA
TACGATTTGCGCCCATATGGCCGAGAAAGCTTCCGGTACATACAAACTGTTATTTGTGCCGGGGCAGCTGAGCAAAGAAG
CATATTCTTCTATCATTGAGGAACCTTCTATTAAAGAAGTGCTTCAGACGATTCAATCATCCAGTATGGTGATTCATGGA
ATCGGGGATGCTAAAACAATGGCAGAACGAAGAAATACGCCAAAGGAAGATTTGAAGAAAATAGAAGAAAATGAGGCAGT
TGCAGAAGCGTTCGGCTACTATTTCGACCGCCACGGGGAAGTCATTCACAAAGTGCACAGCGTAGGCATCCAGCTTGAGG
ATCTCGATTCGATCCCGAACATCATTGCGGTGGCGGGAGGCTCGTCAAAAGCTGACGCCATAGAGGCATACTTCAAAAAG
CCGCGCAATACGGTTTTGATCACTGATGAAGGAGCCGCAAAACAGTTATTAAGGGAAGCTTCTTCCCTCAATATAAATTA
A

Upstream 100 bases:

>100_bases
AGGAATGTAAGCAGGAGTAATTTTTTTTGGCTGAGGTGGGACGTTTTCAGTCACTGCGGGACATTATTCGTCCAGGATGA
GATGAAAGGAACGTTTTGGC

Downstream 100 bases:

>100_bases
ATATCTCTTATTTACTTAAAGGAGGAAATCATCATGGCAGTAAAAGTCGGTATTAATGGTTTTGGTCGTATTGGACGCAA
TGTATTCCGCGCAGCATTAA

Product: CggR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNQLIQAQKKLLPDLLDVMQKRYKILQYIRLTEPIGRRSLAASLGISERILRAEVQFLKEQNLLEIKTTGMILTPEGSDL
LKVLEDTMKDVLGLTHLENTLKERLNLDEVIIVSGDSDQSPWVKKEMGRAAVACMKNRFTGENIVAVTGGTTLEAVAEMM
TPDSKNRKLLFVPARGGLGENVRNQANTICAHMAEKASGTYKLLFVPGQLSKEAYSSIIEEPSIKEVLQTIQSSSMVIHG
IGDAKTMAERRNTPKEDLKKIEENEAVAEAFGYYFDRHGEVIHKVHSVGIQLEDLDSIPNIIAVAGGSSKADAIEAYFKK
PRNTVLITDEGAAKQLLREASSLNIN

Sequences:

>Translated_346_residues
MNQLIQAQKKLLPDLLDVMQKRYKILQYIRLTEPIGRRSLAASLGISERILRAEVQFLKEQNLLEIKTTGMILTPEGSDL
LKVLEDTMKDVLGLTHLENTLKERLNLDEVIIVSGDSDQSPWVKKEMGRAAVACMKNRFTGENIVAVTGGTTLEAVAEMM
TPDSKNRKLLFVPARGGLGENVRNQANTICAHMAEKASGTYKLLFVPGQLSKEAYSSIIEEPSIKEVLQTIQSSSMVIHG
IGDAKTMAERRNTPKEDLKKIEENEAVAEAFGYYFDRHGEVIHKVHSVGIQLEDLDSIPNIIAVAGGSSKADAIEAYFKK
PRNTVLITDEGAAKQLLREASSLNIN
>Mature_346_residues
MNQLIQAQKKLLPDLLDVMQKRYKILQYIRLTEPIGRRSLAASLGISERILRAEVQFLKEQNLLEIKTTGMILTPEGSDL
LKVLEDTMKDVLGLTHLENTLKERLNLDEVIIVSGDSDQSPWVKKEMGRAAVACMKNRFTGENIVAVTGGTTLEAVAEMM
TPDSKNRKLLFVPARGGLGENVRNQANTICAHMAEKASGTYKLLFVPGQLSKEAYSSIIEEPSIKEVLQTIQSSSMVIHG
IGDAKTMAERRNTPKEDLKKIEENEAVAEAFGYYFDRHGEVIHKVHSVGIQLEDLDSIPNIIAVAGGSSKADAIEAYFKK
PRNTVLITDEGAAKQLLREASSLNIN

Specific function: Represses the transcription of the gapA gene [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=260, Percent_Identity=25, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 38244; Mature: 38244

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLIQAQKKLLPDLLDVMQKRYKILQYIRLTEPIGRRSLAASLGISERILRAEVQFLKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH
QNLLEIKTTGMILTPEGSDLLKVLEDTMKDVLGLTHLENTLKERLNLDEVIIVSGDSDQS
CCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
PWVKKEMGRAAVACMKNRFTGENIVAVTGGTTLEAVAEMMTPDSKNRKLLFVPARGGLGE
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCH
NVRNQANTICAHMAEKASGTYKLLFVPGQLSKEAYSSIIEEPSIKEVLQTIQSSSMVIHG
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEE
IGDAKTMAERRNTPKEDLKKIEENEAVAEAFGYYFDRHGEVIHKVHSVGIQLEDLDSIPN
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEHHHHCCCC
IIAVAGGSSKADAIEAYFKKPRNTVLITDEGAAKQLLREASSLNIN
EEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQLIQAQKKLLPDLLDVMQKRYKILQYIRLTEPIGRRSLAASLGISERILRAEVQFLKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH
QNLLEIKTTGMILTPEGSDLLKVLEDTMKDVLGLTHLENTLKERLNLDEVIIVSGDSDQS
CCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
PWVKKEMGRAAVACMKNRFTGENIVAVTGGTTLEAVAEMMTPDSKNRKLLFVPARGGLGE
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCH
NVRNQANTICAHMAEKASGTYKLLFVPGQLSKEAYSSIIEEPSIKEVLQTIQSSSMVIHG
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEE
IGDAKTMAERRNTPKEDLKKIEENEAVAEAFGYYFDRHGEVIHKVHSVGIQLEDLDSIPN
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEHHHHCCCC
IIAVAGGSSKADAIEAYFKKPRNTVLITDEGAAKQLLREASSLNIN
EEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]