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The map label for this gene is pdxA [H]

Identifier: 52787192

GI number: 52787192

Start: 3339989

End: 3340228

Strand: Reverse

Name: pdxA [H]

Synonym: BLi03501

Alternate gene names: 52787192

Gene position: 3340228-3339989 (Counterclockwise)

Preceding gene: 52787193

Following gene: 52787190

Centisome position: 79.1

GC content: 54.17

Gene sequence:

>240_bases
GTGAGAGGCGACTTTGATATAGTGGTGGCTATGTATCATGACCAAGGACACGGCCCGATTAAGGTGCTTGGCCTTGAAGC
CGGTGTGAACATTGCAGTCGGCCTGCCGATTATCCGTACGAGTGTTGACCACGGAACAGCCTTTGATATTGCGGGAACCG
GCAAAGCCGATCCTGCGAGTATAGAAGAAGCGGTGAGACAGGCGATCATGCTGTCCGGTACGCGTGAGCGGCATGCATAA

Upstream 100 bases:

>100_bases
AGAAGAGGAAGAGAAAATTGTCCTTGCCGTTGAACGCGCACAAAGTGAAGGTATACAGGCATTCGGTCCGCTGCCCGCTG
ACACGCTTTTCTTCAGAGCA

Downstream 100 bases:

>100_bases
AAAAAGAAGAGCCTTCCGATTAAGGAGGCTCTTCTTTTTAGTTCATATAGGTGCCGCCGTTAATATTAATGGTTTCGCCT
GTCATAAAGTCAGATTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: 4-(phosphohydroxy)-L-threonine dehydrogenase [H]

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MRGDFDIVVAMYHDQGHGPIKVLGLEAGVNIAVGLPIIRTSVDHGTAFDIAGTGKADPASIEEAVRQAIMLSGTRERHA

Sequences:

>Translated_79_residues
MRGDFDIVVAMYHDQGHGPIKVLGLEAGVNIAVGLPIIRTSVDHGTAFDIAGTGKADPASIEEAVRQAIMLSGTRERHA
>Mature_79_residues
MRGDFDIVVAMYHDQGHGPIKVLGLEAGVNIAVGLPIIRTSVDHGTAFDIAGTGKADPASIEEAVRQAIMLSGTRERHA

Specific function: Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) [H]

COG id: COG1995

COG function: function code H; Pyridoxal phosphate biosynthesis protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdxA family [H]

Homologues:

Organism=Escherichia coli, GI1786237, Length=66, Percent_Identity=57.5757575757576, Blast_Score=73, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005255 [H]

Pfam domain/function: PF04166 PdxA [H]

EC number: =1.1.1.262 [H]

Molecular weight: Translated: 8323; Mature: 8323

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDFDIVVAMYHDQGHGPIKVLGLEAGVNIAVGLPIIRTSVDHGTAFDIAGTGKADPAS
CCCCEEEEEEEEECCCCCCEEEEEECCCCEEEECCEEEEEECCCCCEEEECCCCCCCCHH
IEEAVRQAIMLSGTRERHA
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRGDFDIVVAMYHDQGHGPIKVLGLEAGVNIAVGLPIIRTSVDHGTAFDIAGTGKADPAS
CCCCEEEEEEEEECCCCCCEEEEEECCCCEEEECCEEEEEECCCCCEEEECCCCCCCCHH
IEEAVRQAIMLSGTRERHA
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]