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The map label for this gene is yusF [H]

Identifier: 52787151

GI number: 52787151

Start: 3303603

End: 3303947

Strand: Reverse

Name: yusF [H]

Synonym: BLi03460

Alternate gene names: 52787151

Gene position: 3303947-3303603 (Counterclockwise)

Preceding gene: 52787152

Following gene: 52787150

Centisome position: 78.24

GC content: 44.93

Gene sequence:

>345_bases
ATGCCGGAAAATGAAAAAGTCATGATCGTCGAAGGGAAATCAGATAAGCAAAAAGTGAAGCATGTCATCGAAGAGCCCGT
GGACATCATATGCACAAACGGAACGATCAGCCAGGCAAAACTCGATGAATTCGCTGAGACGCTGTTCGATAAAGACGTTT
ATATCCTGGTGGATGCCGATGAATCAGGCGAAAAGCTCCGCCGGCAGCTGAAGAGGGAGCTTCCCCAAGCTTCGCATCTA
TACATTGATAGAGTATACAAAGAAGTCGCTTCCGCCCCGAGTCAGCATGTTGCAGAAGTATTATTTCGTTCAAACATCCG
GGTACATACAAAATATCTATTATAA

Upstream 100 bases:

>100_bases
AATATGTAGACTGTGATGACCACCAAGGCTGGTGTTAATCAAGTCAGGCGGTGAATATTCACTGCCTTTTTTTACAAGTA
AATCTTTAAAGGTGATCCAT

Downstream 100 bases:

>100_bases
AACGTATTGAGGTGCGGTTCAACAGATGCAAGAACTTCAAGAAAAAGAGCTAAAACGGCTAGAGCATGAAACTTGTCTTC
TATATGTATACACGCCGTTC

Product: YusF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPENEKVMIVEGKSDKQKVKHVIEEPVDIICTNGTISQAKLDEFAETLFDKDVYILVDADESGEKLRRQLKRELPQASHL
YIDRVYKEVASAPSQHVAEVLFRSNIRVHTKYLL

Sequences:

>Translated_114_residues
MPENEKVMIVEGKSDKQKVKHVIEEPVDIICTNGTISQAKLDEFAETLFDKDVYILVDADESGEKLRRQLKRELPQASHL
YIDRVYKEVASAPSQHVAEVLFRSNIRVHTKYLL
>Mature_113_residues
PENEKVMIVEGKSDKQKVKHVIEEPVDIICTNGTISQAKLDEFAETLFDKDVYILVDADESGEKLRRQLKRELPQASHLY
IDRVYKEVASAPSQHVAEVLFRSNIRVHTKYLL

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 13124; Mature: 12993

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPENEKVMIVEGKSDKQKVKHVIEEPVDIICTNGTISQAKLDEFAETLFDKDVYILVDAD
CCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC
ESGEKLRRQLKRELPQASHLYIDRVYKEVASAPSQHVAEVLFRSNIRVHTKYLL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
PENEKVMIVEGKSDKQKVKHVIEEPVDIICTNGTISQAKLDEFAETLFDKDVYILVDAD
CCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC
ESGEKLRRQLKRELPQASHLYIDRVYKEVASAPSQHVAEVLFRSNIRVHTKYLL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]