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The map label for this gene is yunD [H]

Identifier: 52787120

GI number: 52787120

Start: 3272022

End: 3273377

Strand: Reverse

Name: yunD [H]

Synonym: BLi03428

Alternate gene names: 52787120

Gene position: 3273377-3272022 (Counterclockwise)

Preceding gene: 52787121

Following gene: 52787119

Centisome position: 77.52

GC content: 50.37

Gene sequence:

>1356_bases
ATGACGGAAAAGCTCCATATCTACCATACGAACGATTTGCACAGCCATTTTGAAAACTGGCCGAAAATCGTCGATTACAT
TCAGACACAAAGACAGAAACATGAAGAGCAGGGGGAAGAAGTGCTTTTGTTCGACCTCGGCGATCATGTCGACAGATTCC
ATCCGATATCTGAGGCTACCTTCGGAAAAGCGAATGTGGAGCTGTTGAACCGTCTGCAGTATGATGCTGCAACGATCGGG
AACAATGAAGGAATTACACTGCCGCATCAGGAGTTGGATACACTTTATGACAACGCTCAGTTTCCTGTCGTTGTCTCCAA
TTTGTTTGACGGAGAAGGGAAGAGGCCCGGCTGGGCAGCGCCGTATTTGCTCAAAAAGGTGAAGAGCGGCGCAACTCTTG
CCATTCTCGGTGTGACAGTCCCGTACTATCCGATCTATCGCCAGCTTGGCTGGACGGTTACAGACGCATTTGAAAGCATC
GGAGAGATGCTAAGTGAAATCAAAGAAAAAGCCGACACTGTCATCCTTCTTTCACACCTTGGCATTTTGGACGATCAGCG
CGTCGCGGAGGCTTTTCCCGAAATCGACCTGATCCTCGGCTCCCACACCCATCACCTGCTTGAAGAAGGGATGATGAAAG
ACGGCGTTATGCTGGCCTGCGCGGAAAAGTACGGGAACTATGTCGGTCATGTTGAACTGACATATAACGGAGCGCTTGAG
AACATCACAGCAACCGTCATGAAGACGGCAGATTGGAATGAAGAATCAGAGGAGACGATTCGTTTTCTGAAGGAAAAAGA
GAGAGAAGCCGGACATCTCCTTGAAGAGGAAATTGCGACATTGGACAACACCCTTGAAACCGCCTGGTTCCGCAGAAGCG
CCCTTCCGCAAATGCTGGCAGATGCCTTAAAGGAATGGTGTGAGGCGGAAATCGGGATGGTCAACTCAGGCATTGTGCTG
GAGTCTCTTTCACAAGGTCCGGTGACGAAAGCCGATGTTCACCGCATCTGTCCGCATCCGATTAATCCGGTCAAACTGAA
GCTGACGGGACGAGAGCTGAAAGAGGTCATCCTCCATGCATCATCAGAACAAACCGAGAAGCTGCGCATTAAAGGGCTCG
GTTTTCGCGGCGAAGTGATGGGGAAGATGCTGTATGCCGGCCTTGACCCGGAAAAGCTCTCCGTCAACGGAGCGGACATT
GAAGATGATGCGTTCTACACGCTCGCCACGATTGATATGTTTACACTCGGAACGCTGTTTCCTGTTATCCGCGATGCGGA
AGATATTGACTACTTTATGCCTGAATTCCTGCGCGATCTGCTCGCCTGGAAGCTGAAAAAAGCAAACCGGTCCTAA

Upstream 100 bases:

>100_bases
ACAAAGACGATCGTATTGATCATGCGGTTCGTATTGATTCTCATCGGAATCAGATTAATCTATCAAGGCGTGTTTAGTTA
AACGTTAGGGAGAGATTTGC

Downstream 100 bases:

>100_bases
ACAGATCTCTAAGATTCGGGGCAAACCGGAACATGTCTCTCGCTTTATCATACATTAATGGTAAAGGAGGGATAGCGATG
GTAAATTTAACTCCGATCAT

Product: YunD

Products: Phosphate; Uridine [C]

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MTEKLHIYHTNDLHSHFENWPKIVDYIQTQRQKHEEQGEEVLLFDLGDHVDRFHPISEATFGKANVELLNRLQYDAATIG
NNEGITLPHQELDTLYDNAQFPVVVSNLFDGEGKRPGWAAPYLLKKVKSGATLAILGVTVPYYPIYRQLGWTVTDAFESI
GEMLSEIKEKADTVILLSHLGILDDQRVAEAFPEIDLILGSHTHHLLEEGMMKDGVMLACAEKYGNYVGHVELTYNGALE
NITATVMKTADWNEESEETIRFLKEKEREAGHLLEEEIATLDNTLETAWFRRSALPQMLADALKEWCEAEIGMVNSGIVL
ESLSQGPVTKADVHRICPHPINPVKLKLTGRELKEVILHASSEQTEKLRIKGLGFRGEVMGKMLYAGLDPEKLSVNGADI
EDDAFYTLATIDMFTLGTLFPVIRDAEDIDYFMPEFLRDLLAWKLKKANRS

Sequences:

>Translated_451_residues
MTEKLHIYHTNDLHSHFENWPKIVDYIQTQRQKHEEQGEEVLLFDLGDHVDRFHPISEATFGKANVELLNRLQYDAATIG
NNEGITLPHQELDTLYDNAQFPVVVSNLFDGEGKRPGWAAPYLLKKVKSGATLAILGVTVPYYPIYRQLGWTVTDAFESI
GEMLSEIKEKADTVILLSHLGILDDQRVAEAFPEIDLILGSHTHHLLEEGMMKDGVMLACAEKYGNYVGHVELTYNGALE
NITATVMKTADWNEESEETIRFLKEKEREAGHLLEEEIATLDNTLETAWFRRSALPQMLADALKEWCEAEIGMVNSGIVL
ESLSQGPVTKADVHRICPHPINPVKLKLTGRELKEVILHASSEQTEKLRIKGLGFRGEVMGKMLYAGLDPEKLSVNGADI
EDDAFYTLATIDMFTLGTLFPVIRDAEDIDYFMPEFLRDLLAWKLKKANRS
>Mature_450_residues
TEKLHIYHTNDLHSHFENWPKIVDYIQTQRQKHEEQGEEVLLFDLGDHVDRFHPISEATFGKANVELLNRLQYDAATIGN
NEGITLPHQELDTLYDNAQFPVVVSNLFDGEGKRPGWAAPYLLKKVKSGATLAILGVTVPYYPIYRQLGWTVTDAFESIG
EMLSEIKEKADTVILLSHLGILDDQRVAEAFPEIDLILGSHTHHLLEEGMMKDGVMLACAEKYGNYVGHVELTYNGALEN
ITATVMKTADWNEESEETIRFLKEKEREAGHLLEEEIATLDNTLETAWFRRSALPQMLADALKEWCEAEIGMVNSGIVLE
SLSQGPVTKADVHRICPHPINPVKLKLTGRELKEVILHASSEQTEKLRIKGLGFRGEVMGKMLYAGLDPEKLSVNGADIE
DDAFYTLATIDMFTLGTLFPVIRDAEDIDYFMPEFLRDLLAWKLKKANRS

Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008334
- InterPro:   IPR006179
- InterPro:   IPR011240 [H]

Pfam domain/function: PF02872 5_nucleotid_C [H]

EC number: 3.6.1.45; 3.1.3.5 [C]

Molecular weight: Translated: 50936; Mature: 50804

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKLHIYHTNDLHSHFENWPKIVDYIQTQRQKHEEQGEEVLLFDLGDHVDRFHPISEAT
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCC
FGKANVELLNRLQYDAATIGNNEGITLPHQELDTLYDNAQFPVVVSNLFDGEGKRPGWAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCH
PYLLKKVKSGATLAILGVTVPYYPIYRQLGWTVTDAFESIGEMLSEIKEKADTVILLSHL
HHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEHHC
GILDDQRVAEAFPEIDLILGSHTHHLLEEGMMKDGVMLACAEKYGNYVGHVELTYNGALE
CCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHCCCHHEEEHHHHCCEEEEEEEEECCCHH
NITATVMKTADWNEESEETIRFLKEKEREAGHLLEEEIATLDNTLETAWFRRSALPQMLA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALKEWCEAEIGMVNSGIVLESLSQGPVTKADVHRICPHPINPVKLKLTGRELKEVILHA
HHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEECHHHHHHHHHHC
SSEQTEKLRIKGLGFRGEVMGKMLYAGLDPEKLSVNGADIEDDAFYTLATIDMFTLGTLF
CCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEHHHHHHHHHHHHH
PVIRDAEDIDYFMPEFLRDLLAWKLKKANRS
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TEKLHIYHTNDLHSHFENWPKIVDYIQTQRQKHEEQGEEVLLFDLGDHVDRFHPISEAT
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCC
FGKANVELLNRLQYDAATIGNNEGITLPHQELDTLYDNAQFPVVVSNLFDGEGKRPGWAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCH
PYLLKKVKSGATLAILGVTVPYYPIYRQLGWTVTDAFESIGEMLSEIKEKADTVILLSHL
HHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEHHC
GILDDQRVAEAFPEIDLILGSHTHHLLEEGMMKDGVMLACAEKYGNYVGHVELTYNGALE
CCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHCCCHHEEEHHHHCCEEEEEEEEECCCHH
NITATVMKTADWNEESEETIRFLKEKEREAGHLLEEEIATLDNTLETAWFRRSALPQMLA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALKEWCEAEIGMVNSGIVLESLSQGPVTKADVHRICPHPINPVKLKLTGRELKEVILHA
HHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEECHHHHHHHHHHC
SSEQTEKLRIKGLGFRGEVMGKMLYAGLDPEKLSVNGADIEDDAFYTLATIDMFTLGTLF
CCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEHHHHHHHHHHHHH
PVIRDAEDIDYFMPEFLRDLLAWKLKKANRS
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; UMP [C]

Specific reaction: H2O + UMP --> Phosphate + Uridine [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Inhibitor from Salmonella typhimurium cytoplasm [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]