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The map label for this gene is yuxL [H]

Identifier: 52787103

GI number: 52787103

Start: 3256151

End: 3258112

Strand: Reverse

Name: yuxL [H]

Synonym: BLi03411

Alternate gene names: 52787103

Gene position: 3258112-3256151 (Counterclockwise)

Preceding gene: 52787104

Following gene: 52787101

Centisome position: 77.16

GC content: 49.95

Gene sequence:

>1962_bases
ATGAAGCAGCTGATAACCGAAAAAGACCTCATCAAGCTTGTATCCATTACCGATCCCCAGTATTCGCCCGATGGTGCAAA
AATCGCCTACGTCCAAACAAAAGTAAACGAAAAACAGGACTCATATGATTCGCATATCATGATCTACGACCGCGAAAAAC
AAGCTTCGGTGCAATGGACGTTTGGGAAAGGCAGAAACCAGCATCCCCGCTGGTCGCCGGACGGCAAATACCTTGCATTT
ACGTCCAATCGCGAGGAAACCGCACAAATTTACGTGATAAGCGCCGCCGGGGGAGAAGCGAGAAAAGTGACCGATATTCC
CTATGATGTATCACAGCCTGAATGGTCGCCGGACGGCAAGTCATTGCTTTGTTCAGTGAAGCTGACAAAAGAGGAAAGCG
TCGACGATGAGAAGAAAACCGAGATTGAAGACCACGAACCGCTGGAAGTCGATTCTTTGTCATATAAAGCAGACGGCCAA
GGGTTTAAAAGGGGAAAGTATACGCAGCTTGTCCTCGTTCAAGTGGAAACCGGGGAAATGAAACAGCTGACCGATCTTGA
ACGCGACCATTTCAGCCATGCATTTTCACCGTGCGGAGATCAGATTGCATTTTGCGCCAATCAAACGGATATGCGTGTGA
ACGATGTCTACTTGATGAACCTTTCGACAGGTGATTTGAAGCGCCTCACAGGTCAAAACGGCATTTTTTCTTCACTATCG
TTTTCTCCTGACGGCAAACACCTTGCATTTATCGGAAACGAGAAAGAATATCAAAACGCCACGCTCGATAAAGCATGGCT
GTATGATATTGAAACAGGAAAACTAACGTGTCTGACGGAAATGCTTGACGTCCATCTCAGCGATGCGGTGGCAGGAGACA
GCCTTGTCGGAGGCGTTCTTCCGAAACCGGCCTGGACCAAAGACGGAAACGGCTTTTATGTCATCGGATCTGACCAGGGT
TCTACAGGCATTTACTACATATCAATCGAAGGTCTTGCTTATCCGGTCCGGTTGGAAAAAGAGCATGTGAACGGATTCAG
CCTGCATCCGGACGAAAGTGGCTTTGCGGCATCCATAGCCCTGCCCGTCCGGCCGAGCGAACTTTACCATCTCCAATTGG
GTGAAGAAAAAGCGGAGCGACTAACAGATGCCAACCAAGCGTTTACGGAAGAACATATCATATCGGAACCGGAGGAGCTT
CAATTTCAGGCAGCGGACGGTCTGACAATTCACGGATGGCTGATAAAGCCCGCCCAATATGAAAAAGGAAACACGTATCC
GCTCATTCTGGAAGTGCACGGCGGACCTCACGCCATGTATGCGAATGCTTATTTTCATGAATTTCAAGTGCTGGCCGCAA
AGGGAAGCGCCGTCGTATATGTTAACCCGCGGGGAAGCCACGGCTACGGACAGGATTTTGTCAACCGGGTGAGGGGCGAC
TACGGCGGTGGAGATTTTAAGGATGTAATGGCGGCTGTTGACCACGTGCTTGAACATTATGATTTCGTCGATCAAGAAAG
GCTCGGCATCACCGGAGGAAGCTACGGGGGCTTTATGACAAACTGGGCTGTCGGCCACACGAAGCGCTTCAAGGCCGCAG
TGACACAGAGGTCCATTTCCAACTGGATCAGTTTTTACGGGGTAAGCGACATCGGCTATTTTTTCACAGACTGGCAGCTC
GGTGCAGACCTTTTTGAAGATCCAGGCAAACTGTGGGAGCATTCGCCGCTCAAATACGCGGACAAGGTGGAGACCCCTCT
TCTCATTCTGCATGGCGAACGGGACGACAGGTGCCCGATTGAACAGGCGGAACAGCTGTTCACGGCGCTGAAAAAAATGG
GGAAAGAAGTAAAACTCGTCAGATTTCCGAACGCGTCACACGATTTATCAAGAAGCGGGCATCCGAAGCAGCGGATCAGG
CGGCTTGAGTATATTGCAGGCTGGTTTGAAGCTTATCTATAA

Upstream 100 bases:

>100_bases
AAGAGCTTTTTCGGCTCTTTTTTTGTTTGCCTTCAAAACAAGGATTTTTATTTAGGAAGTCGAAGTAGTATGGCAAACAG
ACATGAGGAGGAGAAACGAC

Downstream 100 bases:

>100_bases
AAAAGAAAAGGCTGCCGTACACTACGGCAGCCTCAGCGTGTCGACAAACCCTCGCATTCGTTGTCAGGGCTGCGCGTCGG
TGCTCACGAATTCCAACATT

Product: YuxL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MKQLITEKDLIKLVSITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPDGKYLAF
TSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGKSLLCSVKLTKEESVDDEKKTEIEDHEPLEVDSLSYKADGQ
GFKRGKYTQLVLVQVETGEMKQLTDLERDHFSHAFSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLS
FSPDGKHLAFIGNEKEYQNATLDKAWLYDIETGKLTCLTEMLDVHLSDAVAGDSLVGGVLPKPAWTKDGNGFYVIGSDQG
STGIYYISIEGLAYPVRLEKEHVNGFSLHPDESGFAASIALPVRPSELYHLQLGEEKAERLTDANQAFTEEHIISEPEEL
QFQAADGLTIHGWLIKPAQYEKGNTYPLILEVHGGPHAMYANAYFHEFQVLAAKGSAVVYVNPRGSHGYGQDFVNRVRGD
YGGGDFKDVMAAVDHVLEHYDFVDQERLGITGGSYGGFMTNWAVGHTKRFKAAVTQRSISNWISFYGVSDIGYFFTDWQL
GADLFEDPGKLWEHSPLKYADKVETPLLILHGERDDRCPIEQAEQLFTALKKMGKEVKLVRFPNASHDLSRSGHPKQRIR
RLEYIAGWFEAYL

Sequences:

>Translated_653_residues
MKQLITEKDLIKLVSITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPDGKYLAF
TSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGKSLLCSVKLTKEESVDDEKKTEIEDHEPLEVDSLSYKADGQ
GFKRGKYTQLVLVQVETGEMKQLTDLERDHFSHAFSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLS
FSPDGKHLAFIGNEKEYQNATLDKAWLYDIETGKLTCLTEMLDVHLSDAVAGDSLVGGVLPKPAWTKDGNGFYVIGSDQG
STGIYYISIEGLAYPVRLEKEHVNGFSLHPDESGFAASIALPVRPSELYHLQLGEEKAERLTDANQAFTEEHIISEPEEL
QFQAADGLTIHGWLIKPAQYEKGNTYPLILEVHGGPHAMYANAYFHEFQVLAAKGSAVVYVNPRGSHGYGQDFVNRVRGD
YGGGDFKDVMAAVDHVLEHYDFVDQERLGITGGSYGGFMTNWAVGHTKRFKAAVTQRSISNWISFYGVSDIGYFFTDWQL
GADLFEDPGKLWEHSPLKYADKVETPLLILHGERDDRCPIEQAEQLFTALKKMGKEVKLVRFPNASHDLSRSGHPKQRIR
RLEYIAGWFEAYL
>Mature_653_residues
MKQLITEKDLIKLVSITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPDGKYLAF
TSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGKSLLCSVKLTKEESVDDEKKTEIEDHEPLEVDSLSYKADGQ
GFKRGKYTQLVLVQVETGEMKQLTDLERDHFSHAFSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLS
FSPDGKHLAFIGNEKEYQNATLDKAWLYDIETGKLTCLTEMLDVHLSDAVAGDSLVGGVLPKPAWTKDGNGFYVIGSDQG
STGIYYISIEGLAYPVRLEKEHVNGFSLHPDESGFAASIALPVRPSELYHLQLGEEKAERLTDANQAFTEEHIISEPEEL
QFQAADGLTIHGWLIKPAQYEKGNTYPLILEVHGGPHAMYANAYFHEFQVLAAKGSAVVYVNPRGSHGYGQDFVNRVRGD
YGGGDFKDVMAAVDHVLEHYDFVDQERLGITGGSYGGFMTNWAVGHTKRFKAAVTQRSISNWISFYGVSDIGYFFTDWQL
GADLFEDPGKLWEHSPLKYADKVETPLLILHGERDDRCPIEQAEQLFTALKKMGKEVKLVRFPNASHDLSRSGHPKQRIR
RLEYIAGWFEAYL

Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3 And K). Necessary For The Colicins To Reach Their Respective Targets After Initial Binding To The Bacteria. [C]

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=453, Percent_Identity=25.3863134657837, Blast_Score=143, Evalue=7e-34,
Organism=Homo sapiens, GI37577089, Length=243, Percent_Identity=28.3950617283951, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI18450280, Length=243, Percent_Identity=28.3950617283951, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI194394146, Length=243, Percent_Identity=27.9835390946502, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI18765694, Length=695, Percent_Identity=21.1510791366906, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI16933540, Length=241, Percent_Identity=25.7261410788382, Blast_Score=80, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI25149159, Length=453, Percent_Identity=26.0485651214128, Blast_Score=124, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25144537, Length=333, Percent_Identity=26.1261261261261, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI25144540, Length=333, Percent_Identity=26.1261261261261, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17552908, Length=251, Percent_Identity=29.4820717131474, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17564632, Length=221, Percent_Identity=28.9592760180996, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17564634, Length=221, Percent_Identity=28.9592760180996, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17550672, Length=238, Percent_Identity=23.9495798319328, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17508017, Length=258, Percent_Identity=24.4186046511628, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508019, Length=258, Percent_Identity=24.4186046511628, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324793, Length=243, Percent_Identity=24.6913580246914, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45551969, Length=241, Percent_Identity=28.2157676348548, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI45550825, Length=241, Percent_Identity=28.2157676348548, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI45553511, Length=241, Percent_Identity=28.2157676348548, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24582257, Length=211, Percent_Identity=26.5402843601896, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582032, Length=250, Percent_Identity=22.4, Blast_Score=71, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 73310; Mature: 73310

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLITEKDLIKLVSITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWT
CCCHHCHHHHEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEE
FGKGRNQHPRWSPDGKYLAFTSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGK
ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCC
SLLCSVKLTKEESVDDEKKTEIEDHEPLEVDSLSYKADGQGFKRGKYTQLVLVQVETGEM
EEEEEEEECCCCCCCCHHHCCCCCCCCCEECCEEEECCCCCCCCCCEEEEEEEEECCCCC
KQLTDLERDHFSHAFSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLS
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEEECCCCHHHHCCCCCCCCCCC
FSPDGKHLAFIGNEKEYQNATLDKAWLYDIETGKLTCLTEMLDVHLSDAVAGDSLVGGVL
CCCCCCEEEEECCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCC
PKPAWTKDGNGFYVIGSDQGSTGIYYISIEGLAYPVRLEKEHVNGFSLHPDESGFAASIA
CCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEEEEEHHHCCCEECCCCCCCCEEEEE
LPVRPSELYHLQLGEEKAERLTDANQAFTEEHIISEPEELQFQAADGLTIHGWLIKPAQY
ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCEEEEEEEECCCCC
EKGNTYPLILEVHGGPHAMYANAYFHEFQVLAAKGSAVVYVNPRGSHGYGQDFVNRVRGD
CCCCCEEEEEEECCCCCEEEECCEEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHCCC
YGGGDFKDVMAAVDHVLEHYDFVDQERLGITGGSYGGFMTNWAVGHTKRFKAAVTQRSIS
CCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NWISFYGVSDIGYFFTDWQLGADLFEDPGKLWEHSPLKYADKVETPLLILHGERDDRCPI
HHHHHHCCCCCCEEEECHHCCCHHHCCCHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCH
EQAEQLFTALKKMGKEVKLVRFPNASHDLSRSGHPKQRIRRLEYIAGWFEAYL
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQLITEKDLIKLVSITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWT
CCCHHCHHHHEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEE
FGKGRNQHPRWSPDGKYLAFTSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGK
ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCC
SLLCSVKLTKEESVDDEKKTEIEDHEPLEVDSLSYKADGQGFKRGKYTQLVLVQVETGEM
EEEEEEEECCCCCCCCHHHCCCCCCCCCEECCEEEECCCCCCCCCCEEEEEEEEECCCCC
KQLTDLERDHFSHAFSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLS
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEEECCCCHHHHCCCCCCCCCCC
FSPDGKHLAFIGNEKEYQNATLDKAWLYDIETGKLTCLTEMLDVHLSDAVAGDSLVGGVL
CCCCCCEEEEECCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCC
PKPAWTKDGNGFYVIGSDQGSTGIYYISIEGLAYPVRLEKEHVNGFSLHPDESGFAASIA
CCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEEEEEHHHCCCEECCCCCCCCEEEEE
LPVRPSELYHLQLGEEKAERLTDANQAFTEEHIISEPEELQFQAADGLTIHGWLIKPAQY
ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCEEEEEEEECCCCC
EKGNTYPLILEVHGGPHAMYANAYFHEFQVLAAKGSAVVYVNPRGSHGYGQDFVNRVRGD
CCCCCEEEEEEECCCCCEEEECCEEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHCCC
YGGGDFKDVMAAVDHVLEHYDFVDQERLGITGGSYGGFMTNWAVGHTKRFKAAVTQRSIS
CCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NWISFYGVSDIGYFFTDWQLGADLFEDPGKLWEHSPLKYADKVETPLLILHGERDDRCPI
HHHHHHCCCCCCEEEECHHCCCHHHCCCHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCH
EQAEQLFTALKKMGKEVKLVRFPNASHDLSRSGHPKQRIRRLEYIAGWFEAYL
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]