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The map label for this gene is yukD [H]

Identifier: 52787073

GI number: 52787073

Start: 3231692

End: 3231931

Strand: Reverse

Name: yukD [H]

Synonym: BLi03378

Alternate gene names: 52787073

Gene position: 3231931-3231692 (Counterclockwise)

Preceding gene: 52787074

Following gene: 52787072

Centisome position: 76.54

GC content: 45.0

Gene sequence:

>240_bases
GTGTATGTTGACATTACCATCGATTTAAAACATTACGACGGCAGCGTCTTTGACCTCAGACTGTCGGATTACCATTCTGT
TAAAAAGGTAGTCGACATTGCGTGGCAAGCCAAAAGCATACCGGTGCCTCCCCGGGAAGGCTACTGGGTAAGGGTGACAA
ATAAAGATGCCGTTTTTTCAGGCGAATATACATTATCGCAATGCGGAATTACGACAGGTGACCGTCTGGAAATATTATGA

Upstream 100 bases:

>100_bases
CTAGCCAAATCCGCGGCTAATTTACAGATTAGAAGAATGAGAGAAGCGCCTAATTCAAAAGAAGATGACGGCGCTTTTTC
TATTGAGAGGTGATGAACTG

Downstream 100 bases:

>100_bases
AAGGATCTGGATGAATGGCAGAGAAAAAGAAAACGTATCTCGAAGACCAATTAGAGGCCGTCATGACGAAAGAAGACGGT
ACATATATCTTTCGTTTTCA

Product: YukD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MYVDITIDLKHYDGSVFDLRLSDYHSVKKVVDIAWQAKSIPVPPREGYWVRVTNKDAVFSGEYTLSQCGITTGDRLEIL

Sequences:

>Translated_79_residues
MYVDITIDLKHYDGSVFDLRLSDYHSVKKVVDIAWQAKSIPVPPREGYWVRVTNKDAVFSGEYTLSQCGITTGDRLEIL
>Mature_79_residues
MYVDITIDLKHYDGSVFDLRLSDYHSVKKVVDIAWQAKSIPVPPREGYWVRVTNKDAVFSGEYTLSQCGITTGDRLEIL

Specific function: Unknown

COG id: COG5417

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014921 [H]

Pfam domain/function: PF08817 YukD [H]

EC number: NA

Molecular weight: Translated: 9021; Mature: 9021

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVDITIDLKHYDGSVFDLRLSDYHSVKKVVDIAWQAKSIPVPPREGYWVRVTNKDAVFS
CEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEE
GEYTLSQCGITTGDRLEIL
CCEEEEECCCCCCCEEEEC
>Mature Secondary Structure
MYVDITIDLKHYDGSVFDLRLSDYHSVKKVVDIAWQAKSIPVPPREGYWVRVTNKDAVFS
CEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEE
GEYTLSQCGITTGDRLEIL
CCEEEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9168598; 9384377 [H]