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The map label for this gene is ydfR [H]

Identifier: 52787009

GI number: 52787009

Start: 3174046

End: 3174612

Strand: Reverse

Name: ydfR [H]

Synonym: BLi03311

Alternate gene names: 52787009

Gene position: 3174612-3174046 (Counterclockwise)

Preceding gene: 52787012

Following gene: 52787008

Centisome position: 75.18

GC content: 44.8

Gene sequence:

>567_bases
ATGGCATTTGTATTGGAAACATTGTTTCTCATCTTAACGGGCATTGTTCTGCTGAGAATTTCGGGAAGAAAATCAATTTC
GCAGATGACAATTGCCACCACCGTCGTCATGATATCCATCGGAACGATCATCGTTCAGCCGATTATAGAAGACAGCATTT
TTAAAACGGTGGCAGCTGCATCGATCTTTATCATCGTCCTTCTGTTGATCGAGTACTTGAAAATGAAATTTGATTTTTTT
GAAAGCCTGATTGCGGGGAAAGCCGTTGTATTGATCGAAAACGGGGAGCTCCAGGAGCAGAATTTAAAAAAGCACCGCCT
GACCGTCGACCAGCTGGAAATGAGGCTCCGGACACAGGGGATTTCAAAGTTAGCGGATGTGAAAAACGTAACGCTCGAAT
CAAACGGCCAGATCGGCTACGAGTTATCGGATGATGCCAAGCCTTTCACTATGGGAGAGTATAAAAAATTCCTGCGCATG
CAAAACAACCTGCAGCAGCCGGAGGACAACCTGTTTAAAGAAATCACCGAAGGCCATCTGAACGAACCTGATAAGCAATT
GCGCTAA

Upstream 100 bases:

>100_bases
AATAACCTTATAACATTGTCTTTCCCTATTTGTTCAAATATACTCATACCGCGCAAGCTTCTGAACCATACTAAAAAAAT
AAAACGGTTGGAGTGACACC

Downstream 100 bases:

>100_bases
AGTCCTGGCATATAAAAACGAAAAAAGGAGTTTTTTTCATGATAAGCTTACCTTCTGAACTGGAAAACCGGTCGTTTTCT
CTTTATCACCTCGAACAGAC

Product: YdfR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAFVLETLFLILTGIVLLRISGRKSISQMTIATTVVMISIGTIIVQPIIEDSIFKTVAAASIFIIVLLLIEYLKMKFDFF
ESLIAGKAVVLIENGELQEQNLKKHRLTVDQLEMRLRTQGISKLADVKNVTLESNGQIGYELSDDAKPFTMGEYKKFLRM
QNNLQQPEDNLFKEITEGHLNEPDKQLR

Sequences:

>Translated_188_residues
MAFVLETLFLILTGIVLLRISGRKSISQMTIATTVVMISIGTIIVQPIIEDSIFKTVAAASIFIIVLLLIEYLKMKFDFF
ESLIAGKAVVLIENGELQEQNLKKHRLTVDQLEMRLRTQGISKLADVKNVTLESNGQIGYELSDDAKPFTMGEYKKFLRM
QNNLQQPEDNLFKEITEGHLNEPDKQLR
>Mature_187_residues
AFVLETLFLILTGIVLLRISGRKSISQMTIATTVVMISIGTIIVQPIIEDSIFKTVAAASIFIIVLLLIEYLKMKFDFFE
SLIAGKAVVLIENGELQEQNLKKHRLTVDQLEMRLRTQGISKLADVKNVTLESNGQIGYELSDDAKPFTMGEYKKFLRMQ
NNLQQPEDNLFKEITEGHLNEPDKQLR

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=149, Percent_Identity=30.2013422818792, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 21317; Mature: 21186

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFVLETLFLILTGIVLLRISGRKSISQMTIATTVVMISIGTIIVQPIIEDSIFKTVAAA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIFIIVLLLIEYLKMKFDFFESLIAGKAVVLIENGELQEQNLKKHRLTVDQLEMRLRTQG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHH
ISKLADVKNVTLESNGQIGYELSDDAKPFTMGEYKKFLRMQNNLQQPEDNLFKEITEGHL
HHHHHHHHHCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
NEPDKQLR
CCCHHHCC
>Mature Secondary Structure 
AFVLETLFLILTGIVLLRISGRKSISQMTIATTVVMISIGTIIVQPIIEDSIFKTVAAA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIFIIVLLLIEYLKMKFDFFESLIAGKAVVLIENGELQEQNLKKHRLTVDQLEMRLRTQG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHH
ISKLADVKNVTLESNGQIGYELSDDAKPFTMGEYKKFLRMQNNLQQPEDNLFKEITEGHL
HHHHHHHHHCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
NEPDKQLR
CCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]