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The map label for this gene is ytlD [H]

Identifier: 52786927

GI number: 52786927

Start: 3086937

End: 3087761

Strand: Direct

Name: ytlD [H]

Synonym: BLi03203

Alternate gene names: 52786927

Gene position: 3086937-3087761 (Clockwise)

Preceding gene: 52786926

Following gene: 52786934

Centisome position: 73.1

GC content: 46.91

Gene sequence:

>825_bases
ATGACCTTGAACAACAAACATCCGAAACCAAAAGTTGACTTCCTTCATGAGGCTTTTTTAAAGGAGCAGCAGGCCGAAAA
AAGGCGGGTCCGCTTTTTTCAAATCGCGATTTTCATCGTTTTCTTTTCGCTGTGGGAAACCGCAAGCCGTCTGGCATGGA
TCGATCCGCTGATCTTCAGCTCTCCTTCAGCCGTCTGGGCGCTTTTCCTCGAAAAAATGGGAGACGGATCATTGCCGGGA
CATATCGGTGTAACCGTATTTGAAACCATCCTCGGCTTTCTGGCCGGAACATTGCTTGGAACTTTTCTAGCCGCCCTCTT
ATGGTGGTTCCCGAGGCTCTCCAAAATATTAGATCCGTATCTTGTCGTCTTAAATGCGATGCCGAAAGTGGCGCTGGGTC
CCATTCTCATCGTTGCGATCGGCCCCAGCTTGACGAGCATTATTGCAATGGGCGCCATCATCAGCGTTATCATTACGACT
ATCGTCGTCTATACGTCCTTTCAAGAAATTGATGAAAACTATTTAAAAGTGATGAAAACATTCGGCGCTACGAAACGCGA
GATTTTCAAAGAAGTCATTTTGCCCGCTTCCATTCCGACGATCATATCTACACTGAAGGTCAATGTCGGCTTGAGCTGGG
TCGGTGTCATCGTAGGAGAATTTTTAGTATCGGCTCAAGGCCTCGGCTATATGATCATCTACGGCTTTCAAGTCTTTAAT
TTCAACCTCGTCATGCTGAGCCTCCTGATCATCGCCGTCTTCGCAACATTGATGTATCAAGGTGTCGAGCTGTTGGAAAG
AAAGTGGATGAAAGGCAGAGTATAA

Upstream 100 bases:

>100_bases
ACATTTGCCGTTCCTGAACCGATCAGGAAGCTGACACCGTTTGAAGCGAGGCAGGAACCGGAATTTCAGCCCCTCTTTCA
GAACATATGGAAGGAGCTCA

Downstream 100 bases:

>100_bases
CATGAAAAAACCCTGCAAATGCAGGGCTTTTTATTTGATGATGCCGGCCTTTTTCAGCTTTTCAAGACTGATCGTCAGGA
CGGAATCTTTCATAATAAAA

Product: YtlD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTLNNKHPKPKVDFLHEAFLKEQQAEKRRVRFFQIAIFIVFFSLWETASRLAWIDPLIFSSPSAVWALFLEKMGDGSLPG
HIGVTVFETILGFLAGTLLGTFLAALLWWFPRLSKILDPYLVVLNAMPKVALGPILIVAIGPSLTSIIAMGAIISVIITT
IVVYTSFQEIDENYLKVMKTFGATKREIFKEVILPASIPTIISTLKVNVGLSWVGVIVGEFLVSAQGLGYMIIYGFQVFN
FNLVMLSLLIIAVFATLMYQGVELLERKWMKGRV

Sequences:

>Translated_274_residues
MTLNNKHPKPKVDFLHEAFLKEQQAEKRRVRFFQIAIFIVFFSLWETASRLAWIDPLIFSSPSAVWALFLEKMGDGSLPG
HIGVTVFETILGFLAGTLLGTFLAALLWWFPRLSKILDPYLVVLNAMPKVALGPILIVAIGPSLTSIIAMGAIISVIITT
IVVYTSFQEIDENYLKVMKTFGATKREIFKEVILPASIPTIISTLKVNVGLSWVGVIVGEFLVSAQGLGYMIIYGFQVFN
FNLVMLSLLIIAVFATLMYQGVELLERKWMKGRV
>Mature_273_residues
TLNNKHPKPKVDFLHEAFLKEQQAEKRRVRFFQIAIFIVFFSLWETASRLAWIDPLIFSSPSAVWALFLEKMGDGSLPGH
IGVTVFETILGFLAGTLLGTFLAALLWWFPRLSKILDPYLVVLNAMPKVALGPILIVAIGPSLTSIIAMGAIISVIITTI
VVYTSFQEIDENYLKVMKTFGATKREIFKEVILPASIPTIISTLKVNVGLSWVGVIVGEFLVSAQGLGYMIIYGFQVFNF
NLVMLSLLIIAVFATLMYQGVELLERKWMKGRV

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=232, Percent_Identity=25, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786564, Length=264, Percent_Identity=24.2424242424242, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30619; Mature: 30488

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLNNKHPKPKVDFLHEAFLKEQQAEKRRVRFFQIAIFIVFFSLWETASRLAWIDPLIFS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPSAVWALFLEKMGDGSLPGHIGVTVFETILGFLAGTLLGTFLAALLWWFPRLSKILDPY
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVLNAMPKVALGPILIVAIGPSLTSIIAMGAIISVIITTIVVYTSFQEIDENYLKVMKT
HHHHHCCCHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGATKREIFKEVILPASIPTIISTLKVNVGLSWVGVIVGEFLVSAQGLGYMIIYGFQVFN
HCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHH
FNLVMLSLLIIAVFATLMYQGVELLERKWMKGRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]