Click here to switch to the map view.

The map label for this gene is ytpB [H]

Identifier: 52786914

GI number: 52786914

Start: 3072578

End: 3073657

Strand: Reverse

Name: ytpB [H]

Synonym: BLi03190

Alternate gene names: 52786914

Gene position: 3073657-3072578 (Counterclockwise)

Preceding gene: 52786915

Following gene: 52786910

Centisome position: 72.79

GC content: 46.67

Gene sequence:

>1080_bases
TTGGCAGTACCGGAGCATCCTTTTGGATTAATGGCTAAAGTATACAGAGAGGTTTTTCCCCTTGTTCATCAGGAATTGGA
CAAGTGGAAACGAAAAGCTGAAACGATTCAAAATCCCGAACTGAAAACGCAGGCGAAAGCCAGCATCAGGGATAAAACCT
TTCACTGTGAAGGCGGCGGCATTATGGCCCTTCTTTCAGGAGACAAAATCGAGCAGTCGATCCGGTTTATTACGGCGTAT
CAGACGATAAGCGACTACCTCGACAATCTATGCGACCGGAGCACCTCGCTTGATCCGGATGATTTCACCATGCTTCACCA
GTCGATGAAAGACGCGCTGACAGTCGGGGCTGAATTGAAAAACTATTACCGGTTCAGGGAAGATCAGGATGATCAAGGCT
ATTTGCACGACTTAGTGAAAACATGTCAAGGCGTGCTTGCGGAAATTGAGAACTATGATCTGATCAAGGAGCATCTGATT
GAGCTTTGCAGCTACTATTGCGACCTGCAAGTTCATAAACACGTAGTGGAGCATGAGCGTGTTCCCCGGCTCGAAGCGTG
GTTTGAGAATTATAAATCGGCTCTGCCGAAAATGGAATGGTATGAGTTCTCGGCCTGTGCGGGTTCAACGCTCGGCATCT
TCTGCCTCGTATCGTATTCCGTCCGTCCCGATTTTACTGAATCGATGGCCGGAAAGATCCGCGACAGCTATTTTCCGTAC
ATACAGGGACTGCACATCCTGCTCGATTATTTAATTGACCAGGAGGAAGATTTAATCGGCGGGGATTTGAATTTCTGCAC
TTATTACCCATCACATTCAGATATGATGGAAAGGCTCGAATATTTCATCGAAATGGCGGATGAACATTTGCGCGGGATTC
CGCACGAAAACTTTCACCGTTTGATCAACAGAGGACTGTTAGGCGTTTATTTGTCGGATGACAAAGTAGCGGGCCAGAAG
GAAATCGGCCGGCTTGCGAAAAAGCTGATTAAAGCGAGCGGCAAAACATCTTTCTTTTTCTATATTAACGGCAGGGCATA
CCGCAAAATTCAAAAAATGCCGTGGATGAAAAGCTCGTAA

Upstream 100 bases:

>100_bases
GCTTGTACCACGAAATTTTCAATGAGCCTGAACGGGAAGACGTTTTTAAAGCGGCCAGAGCGTTTGCGGAGCAGTATATA
ACATAATGGAGGTGCATTCT

Downstream 100 bases:

>100_bases
AGAAAAGCTCAAACCGTTTATCGGCTTGAGCTTTTGCCGTTTATAAGCTTTCCGTCCGGTATTGTTTTTCAAGCACAAAG
CGCTTATTATACCGGAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MAVPEHPFGLMAKVYREVFPLVHQELDKWKRKAETIQNPELKTQAKASIRDKTFHCEGGGIMALLSGDKIEQSIRFITAY
QTISDYLDNLCDRSTSLDPDDFTMLHQSMKDALTVGAELKNYYRFREDQDDQGYLHDLVKTCQGVLAEIENYDLIKEHLI
ELCSYYCDLQVHKHVVEHERVPRLEAWFENYKSALPKMEWYEFSACAGSTLGIFCLVSYSVRPDFTESMAGKIRDSYFPY
IQGLHILLDYLIDQEEDLIGGDLNFCTYYPSHSDMMERLEYFIEMADEHLRGIPHENFHRLINRGLLGVYLSDDKVAGQK
EIGRLAKKLIKASGKTSFFFYINGRAYRKIQKMPWMKSS

Sequences:

>Translated_359_residues
MAVPEHPFGLMAKVYREVFPLVHQELDKWKRKAETIQNPELKTQAKASIRDKTFHCEGGGIMALLSGDKIEQSIRFITAY
QTISDYLDNLCDRSTSLDPDDFTMLHQSMKDALTVGAELKNYYRFREDQDDQGYLHDLVKTCQGVLAEIENYDLIKEHLI
ELCSYYCDLQVHKHVVEHERVPRLEAWFENYKSALPKMEWYEFSACAGSTLGIFCLVSYSVRPDFTESMAGKIRDSYFPY
IQGLHILLDYLIDQEEDLIGGDLNFCTYYPSHSDMMERLEYFIEMADEHLRGIPHENFHRLINRGLLGVYLSDDKVAGQK
EIGRLAKKLIKASGKTSFFFYINGRAYRKIQKMPWMKSS
>Mature_358_residues
AVPEHPFGLMAKVYREVFPLVHQELDKWKRKAETIQNPELKTQAKASIRDKTFHCEGGGIMALLSGDKIEQSIRFITAYQ
TISDYLDNLCDRSTSLDPDDFTMLHQSMKDALTVGAELKNYYRFREDQDDQGYLHDLVKTCQGVLAEIENYDLIKEHLIE
LCSYYCDLQVHKHVVEHERVPRLEAWFENYKSALPKMEWYEFSACAGSTLGIFCLVSYSVRPDFTESMAGKIRDSYFPYI
QGLHILLDYLIDQEEDLIGGDLNFCTYYPSHSDMMERLEYFIEMADEHLRGIPHENFHRLINRGLLGVYLSDDKVAGQKE
IGRLAKKLIKASGKTSFFFYINGRAYRKIQKMPWMKSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019712 [H]

Pfam domain/function: PF10776 DUF2600 [H]

EC number: NA

Molecular weight: Translated: 41747; Mature: 41616

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPEHPFGLMAKVYREVFPLVHQELDKWKRKAETIQNPELKTQAKASIRDKTFHCEGGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCC
IMALLSGDKIEQSIRFITAYQTISDYLDNLCDRSTSLDPDDFTMLHQSMKDALTVGAELK
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NYYRFREDQDDQGYLHDLVKTCQGVLAEIENYDLIKEHLIELCSYYCDLQVHKHVVEHER
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPRLEAWFENYKSALPKMEWYEFSACAGSTLGIFCLVSYSVRPDFTESMAGKIRDSYFPY
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH
IQGLHILLDYLIDQEEDLIGGDLNFCTYYPSHSDMMERLEYFIEMADEHLRGIPHENFHR
HHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LINRGLLGVYLSDDKVAGQKEIGRLAKKLIKASGKTSFFFYINGRAYRKIQKMPWMKSS
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVPEHPFGLMAKVYREVFPLVHQELDKWKRKAETIQNPELKTQAKASIRDKTFHCEGGG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCC
IMALLSGDKIEQSIRFITAYQTISDYLDNLCDRSTSLDPDDFTMLHQSMKDALTVGAELK
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NYYRFREDQDDQGYLHDLVKTCQGVLAEIENYDLIKEHLIELCSYYCDLQVHKHVVEHER
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPRLEAWFENYKSALPKMEWYEFSACAGSTLGIFCLVSYSVRPDFTESMAGKIRDSYFPY
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH
IQGLHILLDYLIDQEEDLIGGDLNFCTYYPSHSDMMERLEYFIEMADEHLRGIPHENFHR
HHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LINRGLLGVYLSDDKVAGQKEIGRLAKKLIKASGKTSFFFYINGRAYRKIQKMPWMKSS
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]